Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5839 |
Symbol | |
ID | 5751460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6495090 |
End bp | 6496007 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641300971 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001566852 |
Protein GI | 160901270 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.482004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGCG CTAGGCTTGC GGCCATGGCA AGACGCAACC TCAATGACCT GCTGGCCTTC GTCACCGTGG CGCGCGAGGG CAGCTTCACG CGCGCGGCGG CTGCGCTGGG CGTCACCCAG TCGGCGCTGA GCCAGACCGT GCGCGCGCTG GAGGAGCGCC TGCAGATCCG CCTGCTCACG CGCACCACGC GCAGCGTCTC GCCCACGGCG GCGGGCGAGC GGCTGATGCA GGCCATAGGC CACCGCTTCG ACGAGATCGA GGCCGAACTC GACGCCCTGA CCGCGCTGCG CGACAAGCCC GGCGGCACGG TGCGCATCAC CTGCGGCGAC TACATGCTGC AAAGCACCCT GCTGCCCCGG CTGGCGCCGC TGCTGCTCGC CTATCCGGAC ATCTGCATGG AGTTCGACGT GTACTACGGA TTCCGCGACA TCGTGGCCGA GCGCTTCGAC GCCGGCGTGC GCCTGGGCAG CACCATCGAC AAGGACATGA TCGCCGTGCC CATCGGCCCG CCGCTGCGCA TGGCCGTGGT GTCCTCGCCC GGGTATTTCG CGGAGCACGG CATTCCGAAG AATCCGCAGG ACCTGATGGC GCACCGCTGC ATCAACCAGC GCATGGTGAC CTCGGGCGGC CTGTATGTGT GGGAGTTCGA GCGCCGGGGC CGCAAGATGA ATGTGCGCGT GGACGGGCCG CTGATCTTCA ACACCACCCA GCCCCAGATC GATGCGTACC TGGCCGGGCT GGGCATCACG CTGCTGCCCG AGGACGAGGT CATGCCCTGG ATCCAGAGTG GCCAGCTGCA GCGCGTGTTG GAGGACTGGT GCCCAAGATT CGACGGCCAC CACCTGTACT ACCCCAGCCG CAGGCAGCCC TCGCCCGCGT TCTCGCTGGT GGTCGATGCG CTGCGCTGGC GCGGCTGA
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Protein sequence | MDGARLAAMA RRNLNDLLAF VTVAREGSFT RAAAALGVTQ SALSQTVRAL EERLQIRLLT RTTRSVSPTA AGERLMQAIG HRFDEIEAEL DALTALRDKP GGTVRITCGD YMLQSTLLPR LAPLLLAYPD ICMEFDVYYG FRDIVAERFD AGVRLGSTID KDMIAVPIGP PLRMAVVSSP GYFAEHGIPK NPQDLMAHRC INQRMVTSGG LYVWEFERRG RKMNVRVDGP LIFNTTQPQI DAYLAGLGIT LLPEDEVMPW IQSGQLQRVL EDWCPRFDGH HLYYPSRRQP SPAFSLVVDA LRWRG
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