Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5814 |
Symbol | |
ID | 5751435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6470112 |
End bp | 6471788 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641300946 |
Product | VRR-NUC domain-containing protein |
Protein accession | YP_001566827 |
Protein GI | 160901245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.89064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.302186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCTC CCCACCGCTT CTACTACCTG CACAACTTCC AGCGCGCGCT GGACTGGATT GGCCAGCGTT ACGGCGATCT GCTGGACGCG CCCGAGCAGG CATTCCTCAC CCGTTTCACG CAGCTGCCCC AGCCCTCGCA GGCGCTGATG GTGCGTTTGC TGATGCGGCG CGGGCCGTGG TTTCGGGCCG GCAAGCTGGT GTACGAAGAG ATTCCCGCCA TTGCCGACGC GGCCGCGCCC CTGCTGGAGC TGGGCTGGCT GGATGCGGGC CACCCCATGG CGCTGGAGGA GCTGTTTGCG CTGCACACCA AGCCCGAGCT GCTGCAGCTG TTCGCAGGCG CACCCGTTCA CTCAGGCCTG CGCAAGGCCG AGCTTTTGCA GGCCCTGCAG CCCCTGCATG AGGCGCCCAG GCCCTATGCG CAGTGGCAGC CCCAGGGTGT CGCAGCCGGC GAATCCGCCT GGCGTGTGAT GGTGGGCGCG CTGTGCGAGC GCTTTCGGCT GATGTTCTTC GGCAACCTCT ACCAGGACTG GTCGGAATTC GTGCTGGCCG ACCTGGGCGT GTTCCGCTAC GAGGCCGTGG CCTTCGATGC GGCGTCGCGG GCCTTCCAGT CGCGTGCCGA TGTCGATGGC TACCTGGCCC TGCAGGCCTG CCGCGCGGCG CTGGATGAGG GCGTGGAGAT CGATGCGCTG CTGCAGCAGG TGGCCGGATG CGCCAGCGGC AATGCCTGGC TGGAGCAGCG CCGCGCCAAG GTGCTGCTGC GCATAGGCCA GGCCTGCGAG CGCATGCAGG ACTGGGAGCG TGCCGAGCAG GCTTATGCGC AAAGCCGCTA CCCCGGCGCC CGCCACCGGC GCATGCGCGT GTACGAGCGC ATGGAGCGCT TTGCCGATGC CATGGCGCTG GCCCAGGCCG CCCAGGCCCA GCCCGAGAGC GACGAGGAGC TGCAGCGCGT GGCGCGCATG CTGCCGCGCC TGCGCCGCAG CCTGGGGCAG GGCGCGCGCG GGCGTGCGGC GGCGCTGGCG CCCGTGGTGG CGCAGATGCG CATGGACGTG GAGCTGGAGC TGCCGGCGCG GCCCGCATCG GTCGAGTACG TGCTGCGCGA CCACTGGCAC AGCGACTCCG CGCCGGTGTT CTACGTGGAG AACGCGCTCA TCAACTCGCT GTTCGGTCTG CTGTGCTGGC CGGCCATCTT CGCGCCGCTG CCGGGCGCCT TCTTCCACCC CTTCCAGAGC GGCCCGGCCG ACCTGTCCGC GCCCGACTTC GTGCAGCGCC GCGCAGCCTT GTTCGAGGAA TGCCTGGCGC ATCTGGACGA TGGCAGCTGG CGCGAGGTCA TCGTGCAGCG CCATGCCGAC AAGCAGGGCC TGCAGTCACC CTTCGTGTTC TGGGGCACGC TGAGCGCGCC GCTGCTGGCG CTGGCGCTGG ACTGCATTCC AGCCGCCCAC CTCAAGCTGT TCTTTGCGCG GCTGCTGCGC GACGTGCAGG CCAACCGCAC GGGCTTTCCC GATCTGGTGC GTTTCTGGCC GGCCGAGCGC CGCTACGAAC TGGTCGAGGC CAAGGCCCCC GGCGACAAGC TGCAGGACAA CCAGATCCGC TGGCTGCAGT ACTGTGCCGA GCACGGCATT CCCGTGCGCG TGTGCCATGT GCAGTGGCGC GGCCAGCCGC TGGGAGAGGC CGCGTGA
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Protein sequence | MLPPHRFYYL HNFQRALDWI GQRYGDLLDA PEQAFLTRFT QLPQPSQALM VRLLMRRGPW FRAGKLVYEE IPAIADAAAP LLELGWLDAG HPMALEELFA LHTKPELLQL FAGAPVHSGL RKAELLQALQ PLHEAPRPYA QWQPQGVAAG ESAWRVMVGA LCERFRLMFF GNLYQDWSEF VLADLGVFRY EAVAFDAASR AFQSRADVDG YLALQACRAA LDEGVEIDAL LQQVAGCASG NAWLEQRRAK VLLRIGQACE RMQDWERAEQ AYAQSRYPGA RHRRMRVYER MERFADAMAL AQAAQAQPES DEELQRVARM LPRLRRSLGQ GARGRAAALA PVVAQMRMDV ELELPARPAS VEYVLRDHWH SDSAPVFYVE NALINSLFGL LCWPAIFAPL PGAFFHPFQS GPADLSAPDF VQRRAALFEE CLAHLDDGSW REVIVQRHAD KQGLQSPFVF WGTLSAPLLA LALDCIPAAH LKLFFARLLR DVQANRTGFP DLVRFWPAER RYELVEAKAP GDKLQDNQIR WLQYCAEHGI PVRVCHVQWR GQPLGEAA
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