| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5802 |
|---|
| Symbol | |
|---|
| ID | 5751423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6455973 |
|---|
| End bp | 6456473 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641300934 |
|---|
| Product | tail collar domain-containing protein |
|---|
| Protein accession | YP_001566815 |
|---|
| Protein GI | 160901233 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4675] Microcystin-dependent protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.435853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCTT TTCTCGGAGA GATCCGCGCA TTCGCCTTTG GCCAGGTCCC AAGGGGCTGG
CTGCTGTGCA ACGGAGCGAT TCTGCCGATC AGTACGAACC AGGCCTTGTT TGCGCTGCTG
GGCACCCAAT ACGGCGGCAA TGGCACCTCG AACTTCGCCC TGCCCGATCT GCGTGGTCGC
GCGCCCATTG GATACGGCGG CGGCGTTGTG CTCGGCTTGA TCGACGGCAC GGAAAGCGTC
ACGCTGATCC CCAGCCAGAT GCCCCTGCAC ACCCACCAGC TGCTGTCCAG CGCCGCGGTG
GCCACCACCA ATGTCCCCGG CGGCAATGTG ATGGCCGAGG CCGCCAATGG CCTGTCTGCC
TATGGCGCGC CCACCAATTC CTTCATGGCT GCCCCCGCCG TGAGCACCAG CGGCGGCAGC
CAGCCTCACG AGAACATGCA GCCCTCGCTG GTCATCAACT GGTGCATCGC CAGCTCCGGG
ATCTTCCCGC CCCGCAACTG A
|
|---|
| Protein sequence | MDPFLGEIRA FAFGQVPRGW LLCNGAILPI STNQALFALL GTQYGGNGTS NFALPDLRGR
APIGYGGGVV LGLIDGTESV TLIPSQMPLH THQLLSSAAV ATTNVPGGNV MAEAANGLSA
YGAPTNSFMA APAVSTSGGS QPHENMQPSL VINWCIASSG IFPPRN
|
|---|
| |