Gene Daci_5789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5789 
Symbol 
ID5751410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6442669 
End bp6443583 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID641300921 
ProductSerine O-acetyltransferase 
Protein accessionYP_001566802 
Protein GI160901220 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00634534 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAGTT TCGACATTGC CGGACTCACC CAGAACCTGC ATGCGGCGCG CCGCGAATGG 
CGCGAGGCGC ACGGCCGCAC CCAGGAGCCC GGGGCGCGCG AGTTTCCCTC GCGCGACGCG
CTTTCCACCC TCATCGACCA GCTCAAGGCA GCCCTGTTTC CCATGCGCCT GGGCCCGCAC
GACCTGCGCC AGGAAAGCGA GGACATCTTC GTGGCCCACC AGCTGGACTC GGCCCTGCAT
GCGCTGCTGG GCCAGATACG GCTGGAGCTG CGGCTGTCCG CGCCCCACAC GGCAGCGGGC
GCCGACGCCA TGGCGCTGGA CATCGCACGC GCCTTTGCCG AGTCCCTGCC CCAGATCCGC
CGCCTGCTAG ACAGCGATGT GCTGGCCGCC TTCCACGGCG ATCCCGCCGC GCGCAGCGTG
GACGAGGTGC TGCTGTGCTA TCCGGGCGTG CTGGCCATGA TCCACCACCG CCTGGCCCAC
CAGCTGTACC TGCTGGAGCA GCCGCTGCTG GCGCGCATCG TGGCCGAGCT GTCGCATGCG
CAGACGGGCA TCGACATCCA CCCGGGCGCG AAGATCGGGC GGGGCTTTTT CATGGACCAC
GGCACGGGCG TGGTGATCGG CGAGACCGCG GTGATCGGCG AGCGCGTGCG GCTGTACCAG
GCCGTCACCC TGGGCGCCAA GCGCTTTCCC ACCGATGAGC ACGGCCACCT GCGCAAGGGC
CTGGCGCGCC ATCCGGTGGT GGAGGACGAC GTGGTCATCT ACGCGGGCGC CACCATCCTG
GGCCGCGTCA CGCTGGGGCG CGGCGCCGTC ATCGGCGGCA ATGTCTGGGT GACCGAGGAC
GTGCCGCCCG GCGCCCACGT CACCCAGGCC CATGCGCGCG AGCACGCGCA GCAGCCCCGG
GAGGTGGCCC TATGA
 
Protein sequence
MASFDIAGLT QNLHAARREW REAHGRTQEP GAREFPSRDA LSTLIDQLKA ALFPMRLGPH 
DLRQESEDIF VAHQLDSALH ALLGQIRLEL RLSAPHTAAG ADAMALDIAR AFAESLPQIR
RLLDSDVLAA FHGDPAARSV DEVLLCYPGV LAMIHHRLAH QLYLLEQPLL ARIVAELSHA
QTGIDIHPGA KIGRGFFMDH GTGVVIGETA VIGERVRLYQ AVTLGAKRFP TDEHGHLRKG
LARHPVVEDD VVIYAGATIL GRVTLGRGAV IGGNVWVTED VPPGAHVTQA HAREHAQQPR
EVAL