Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5698 |
Symbol | |
ID | 5751318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6334838 |
End bp | 6336199 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641300830 |
Product | general secretory pathway protein E |
Protein accession | YP_001566711 |
Protein GI | 160901129 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0566211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTATC CCCTGCCCTA TGCGTTTGCG CGCACCAGCC AGCTGCTGAT CGAGGACGAC GGCCACGAGC CCCTGCTCTG GCACGGCCCC TCGCCCGACT GGCAGGCCCT GTCCGAAGTC CAGCGCAAGC ATGCGGTGCA GCGCTGGCAG ATGCTGGATG CGGGCACGCT GGCGCACCGC ATCAGCGCCG CCTATTCGCA GGGCGAATCC AGCGCGGCCC TGGTGGTCAG CGAGGTCGAG TCCGACGCCG ACCTCTCGCG CATGATGCAG GAGCTGCCCG CCGTCGAGGA CTTGCTGGAG ACTGCGGACG ACGCGCCCAT CATCCGCATG CTCAACGCCC TGCTCACGCA GGCCGCGCGC GACGGCGCCA GCGACATCCA CATCGAGCCC TACGAGCGCC ACTCCAGCGT GCGCTTTCGC GTGGACGGCG ACCTGCGGGA GGTCGTGCAG CCCAACCGGG CCCTGCACGC GGCGCTGATC TCGCGCCTGA AGATCATGGC CGACCTGGAC ATCGCCGAAA AGCGGCTGCC CCAGGACGGC CGCATCAGCC TGCGCCTGGG CACGCGCGCC ATCGACGTGC GCGTCTCCAC CCTGCCCAGC GCCCATGGCG AGCGCGCCGT GCTGCGCCTG CTGGACAAGA GCGAGAGCAA GCTCAGCCTG GAGGCCGTGG GCATGCAGGG CGAGACGCTG AGGCGGTTCA CCCACATGAC GGCCCAGCCC CACGGCATCG TGCTGGTCAC CGGCCCCACG GGCTCGGGCA AGACCACCAC GCTGTACGCG GCGCTGTCGC GCATGGACGC CAGCCGCAGC AACATCATGA CGGTGGAGGA CCCCATCGAG TACGAGCTGG CCGGCGTGGG GCAGACCCAG GTCAACGCCA AGATCGACCT GACCTTCGCC AAGGCCCTGC GCGCCATCCT GCGCCAGGAT CCGGACGTGA TCATGATCGG CGAAATCCGC GACTTCGAGA CCGCGCAGAT CGCCATCCAG GCCTCGCTGA CGGGCCACCT GGTGCTGGCC ACGCTGCACA CCAACGATGC CTCCAGCGCC GTCACACGCC TGATCGACAT GGGCGTGGAG CCGTTCCTGC TGTCGTCCTC CCTGCTGGGC GTGCTGGCCC AGCGCCTGGT GCGCAAGATC GACACCACCG AGCCCAGCGG CTACCGGGGG CGCACCGGCA TCTTCGAGAT GCTGGTGGTG GACGACACCA TCCGCGCGCA GATCCATCGC CAGGCCAGCG AGGCCGAGAT CCGCGACACC GCGCTGGCCT CGGGCATGCG CCTGATGCGC GACGATGGCG AGCGCCTGGT GCGCGAGGGC ATCACCACGC CCGAGGAAGT GCTGCGCGTC ACGCGCGACT AG
|
Protein sequence | MRYPLPYAFA RTSQLLIEDD GHEPLLWHGP SPDWQALSEV QRKHAVQRWQ MLDAGTLAHR ISAAYSQGES SAALVVSEVE SDADLSRMMQ ELPAVEDLLE TADDAPIIRM LNALLTQAAR DGASDIHIEP YERHSSVRFR VDGDLREVVQ PNRALHAALI SRLKIMADLD IAEKRLPQDG RISLRLGTRA IDVRVSTLPS AHGERAVLRL LDKSESKLSL EAVGMQGETL RRFTHMTAQP HGIVLVTGPT GSGKTTTLYA ALSRMDASRS NIMTVEDPIE YELAGVGQTQ VNAKIDLTFA KALRAILRQD PDVIMIGEIR DFETAQIAIQ ASLTGHLVLA TLHTNDASSA VTRLIDMGVE PFLLSSSLLG VLAQRLVRKI DTTEPSGYRG RTGIFEMLVV DDTIRAQIHR QASEAEIRDT ALASGMRLMR DDGERLVREG ITTPEEVLRV TRD
|
| |