| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5682 |
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| Symbol | |
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| ID | 5751302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6320283 |
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| End bp | 6321338 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641300814 |
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| Product | porin |
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| Protein accession | YP_001566695 |
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| Protein GI | 160901113 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000517962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.387629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CTCTGATTGC CCTGGCAGTG CTGGCTGCTT CCGGCGCCGC AATGGCTCAA
TCCTCCGTGA CCCTGTTCGG TATCGTGGAC ACCAACGTTG CCTACGTGAA CAAGGACGCA
GCTGGCGACA GCCGTTACGG CCTGGGCACC AGCGGCGCTT CCACGAGCCG TCTGGGCCTG
CGCGGCACGG AAGACCTGGG TGGTGGTCTG AAGGCTGGCT TCTGGCTGGA AGGCGAAATC
TTCGGTGACG ATGGCAACGC CAGCGGCTTC AACTTCAAGC GTCGTTCCAC CGTGAGCCTG
TCGGGCAACT TCGGTGAAGT GCGCCTGGGC CGTGACCTAG TCCCGACCTT CCAAAAGCTG
ACCTCCTACG ACCTGTTCAG CGCCACCGGT ATCGGCCAAT TCATGGGCTT CCGTAACTGG
GCAGCTGGCC AAGGCGCCGA CGACAACGGC ATCCGCGCTA ACAACCTGAT CTCGTACTAC
ACCCCCAACT TCGGCGGTTT CAACGCCGGC TTTGGCTACG CTTTCGACGA AAAGCAAACC
ATCGGTACTG CTGACAGCGT CGGCCGTTAC ATCGGCGGTT ACGTTGCATA CGACAACGGC
CCCCTGAGCG CCAGCCTGGG CCTGGCCCAG CAAAAGACTG CCGTTGGCGG CCTGGCTACC
GACCGTGACG AAATCACCCT GGGTGCTTCG TACAACTTCG GCGTTGCCAA GCTGACCGGC
CTGCTGCAAC AGACCAAGTT CAAGCGTGAC ATCGGCGGCG ACATCAAGAC CAACTCCTAC
ATGCTGGGCG CTTCGGCTCC CGTCGGCGGC GTGGGCGAAG TCAAGCTGCA ATACGCTCTG
TACGACCAAA AGGCCATCGA CTCCAAGGCT CACCAGATCA CTCTGGGCTA CGTCCACAAC
CTGTCCAAGC GCACCGCTCT GTACGGCAAC CTGGCGTTCC TGAAGAACAA GGATCTGTCG
ACCCTGGGCC TGCAAGCTAA GGGCGTGTAC GCTGGTGGCG TGCAAGCTGG CGAAAGCCAG
ACTGGCGTGC AAGTCGGCAT TCGCCACGCT TTCTAA
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| Protein sequence | MKKSLIALAV LAASGAAMAQ SSVTLFGIVD TNVAYVNKDA AGDSRYGLGT SGASTSRLGL
RGTEDLGGGL KAGFWLEGEI FGDDGNASGF NFKRRSTVSL SGNFGEVRLG RDLVPTFQKL
TSYDLFSATG IGQFMGFRNW AAGQGADDNG IRANNLISYY TPNFGGFNAG FGYAFDEKQT
IGTADSVGRY IGGYVAYDNG PLSASLGLAQ QKTAVGGLAT DRDEITLGAS YNFGVAKLTG
LLQQTKFKRD IGGDIKTNSY MLGASAPVGG VGEVKLQYAL YDQKAIDSKA HQITLGYVHN
LSKRTALYGN LAFLKNKDLS TLGLQAKGVY AGGVQAGESQ TGVQVGIRHA F
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