| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5656 |
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| Symbol | |
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| ID | 5751276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6291375 |
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| End bp | 6292880 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300788 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001566669 |
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| Protein GI | 160901087 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.162521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0223313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTC TTGCCGCCCC CGTCTTTCTG ATGCTCGCCA GCCTCTGTGC AGGGTGTGCG
GTAGGCCCTG ACTACCAGCC GCCCGCCCCG GCCCTGCCCC AGGCCTACAT GGGCAGCCGC
GTTCTGGGTG AGACCAAGCC GCCCTCGCCG GCCTCCTCCA CGGACCTTGC AGCCTGGTGG
GCAGCCTTTG GCGATCCGCA GATGGCGCGC CTCGTCACGG CGGCACTGCA GCAAAACCTG
GATGTTGCCC AGGCCGCTGG CCGCGTGCTT CAGGCACGCG CCGGGCTGGA TGCGGCGGCA
GCCGCCCTGC TGCCGTCGGC CCAGATCTCG GCGCAAACGG CCAGGAGCTA TCAGTCGGTC
GAGACTCCGC TAGGCCGGGT GCTCGACTCC ATGCCGGGGT TCGATCGCTA CGGCAGCGCC
CAGGAGGCCA ACCTCGGAGC CAGTTGGGAG CTTGATCTCT TCGGCGGCCT GCGCAGGGCC
CGGCAGGCCT CCCTGGCCGA GTACCAGGCA TCGGAAGCCG GCGCCACTGC CGTGCGGCTC
GCGGTGGCCG CACAGACTGC GGACACCTAT ATCCAGATTC GCGGCCTGCA GGCGCGGCTG
GCAGTGGCAC GCTCGCAAGT GCAAGCCCAG CAGCAACTGC GCTCCATCGT CGAACTGCGG
TTTGGCAAAG GACTGTCACC CGAGCTTCAG CTGCGCCAGG TCGAGGGAGC GCTCGCACGG
GCACAAGCCA CCGTCCCGCC GCTGGAAAAT GCGCTCGAGG CCGCCCTCAA CGCCATGGAC
GTGATGCTGG CCACGGCACC CGGCACGCAC CGGGCCGAAC TGGCCGATCC CCGCCCCGTC
CCCGTATTGC CAACCCTTTC CCTGGCGGAG GCGCCCGGCG ATCTGCTGCG GCGACGCCCG
GACCTCATCG CGGCGGAGCG ACGCCTGGCA GCGTCGAACG CACGCATCGG CGTGGCGATC
GCCGAGTACT ACCCGAAGCT GTCGATCAGC GGCCTGATCG GCAGCGCCAC CTCCATCTCC
GCAGGCAATC TCTTCAGCGC CGGCGCGTCG CAGGCAAGCG TTGTGGGCGG CCTGCGCTGG
CGGCTGTTCG ACTTCGGTCG CATCAACGCC CAGATCCACC AGGCGCAGGC ACAGGAGGCG
GAAAGCCTTG CCGCCTACCG GCAGTCGGTA CTGCGCGCCA CGGAAGAAGT GGAGAACGCC
CTGGTCTCGC TGGACAAGCG GCAGGAGCTG ATGACCGTGC TCGCCAGGGG CGCGGATGCG
CTCACGCGGG CCCGGCAGGC CGCAGGCGCC GCCTACGACA AGGGCGTGGT CAGCCTGATC
GAGGTACTGC AGGCGGATGA AAGCCTGCTG GGCGTGCTCG ATGCACAGGC GCTGGCACGG
ACGGAGTCGG CGCGATCGAC GGTCGCGATC TTCAAGGCAC TTGGCGGCGG CTGGACGCCG
GAGCCCCTGC CTTCCAGGGC GTTGGCGGCC GCCAGCCACG GTCTTCCCGC CAGCGTTGCC
CCCTGA
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| Protein sequence | MPRLAAPVFL MLASLCAGCA VGPDYQPPAP ALPQAYMGSR VLGETKPPSP ASSTDLAAWW
AAFGDPQMAR LVTAALQQNL DVAQAAGRVL QARAGLDAAA AALLPSAQIS AQTARSYQSV
ETPLGRVLDS MPGFDRYGSA QEANLGASWE LDLFGGLRRA RQASLAEYQA SEAGATAVRL
AVAAQTADTY IQIRGLQARL AVARSQVQAQ QQLRSIVELR FGKGLSPELQ LRQVEGALAR
AQATVPPLEN ALEAALNAMD VMLATAPGTH RAELADPRPV PVLPTLSLAE APGDLLRRRP
DLIAAERRLA ASNARIGVAI AEYYPKLSIS GLIGSATSIS AGNLFSAGAS QASVVGGLRW
RLFDFGRINA QIHQAQAQEA ESLAAYRQSV LRATEEVENA LVSLDKRQEL MTVLARGADA
LTRARQAAGA AYDKGVVSLI EVLQADESLL GVLDAQALAR TESARSTVAI FKALGGGWTP
EPLPSRALAA ASHGLPASVA P
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