| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5635 |
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| Symbol | |
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| ID | 5751255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6266909 |
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| End bp | 6267880 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641300768 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001566649 |
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| Protein GI | 160901067 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00232713 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGGTT CGCTGTCTCC GCGCGCCTCG CTCCCCCCGC TCCCCTTCGT CTGCGCACCC
GGCTACCCGG CAGCCCAGGC CTGGCTGCAG GCCCTGCAGG CCGCCCTGCC CGAGGAGCGC
GTGGTGGCGC TCGATACGCT GGATGCCGAC CAGCGCGCGG CCTGCGAGGT CGCCATCGTC
GCCAACCCCC AGCCTGCCGA CCTGCGCACG CTGCCGCGCC TGCAATGGGT GCACAGCGTC
TGGGCCGGCG TGGAGCGCCT GGTGGCCGAC CTGGGCGATA CCGACCTGCG CATCGTCCGC
CTGGTGGACC CGCAACTGGC CGACACCATG GCCGAGGCCG TGCTGGCCTG GACCCTGTAC
CTGCACCGCG ACATGCCGCG CTATGCCCGC CAGCAGGCCG CGCGCCAATG GCTGGCGCAT
GACGGAGTGC GCGCGCAGGA CAGGACGGTG TCGCTGCTGG GCCTGGGCGC ACTGGGCAAG
GCCGCCGCGC AGCGGCTGCT GTCGGCAGGC TTCCAGGTGC GCGGCTGGAG CCGCACGCCC
AGGCACATGG ACGGCGTGCA ATGCCATGCG GGTGATGCCG AGCTGCCCGC CATGCTGGCG
CAGACCGACA TCCTCGTATG CCTGCTGCCG CTCACGCCGC AGACGCGCGG CCTCGTCGGC
GCGCAGGCGC TGGCCGCGCT GCCTGCCCAT GCCTCGCTGA TCAACTTTGC GCGCGGCCCC
ATCGTGGACG ATGCCGCGCT GCGCGCCGCC CTGGACGGCG GCCGCCTGGC CCATGCCGTG
CTGGACGTGT TCGAGCAGGA GCCCCTGCCC GAAGCGTCAT GGCAATGGGC GCACCCCGCC
GTGACCGTGC TGCCCCACAT CTCGGCACCC ACGGACCGCG CGACGGCATC GGCCATCGTG
GCGGGCAACA TCCGGCGCTG GCGCGCCAGC GGCGAGCTGC CGCAGGCGGT GGACGCGGCG
CGGGGCTATT GA
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| Protein sequence | MSGSLSPRAS LPPLPFVCAP GYPAAQAWLQ ALQAALPEER VVALDTLDAD QRAACEVAIV
ANPQPADLRT LPRLQWVHSV WAGVERLVAD LGDTDLRIVR LVDPQLADTM AEAVLAWTLY
LHRDMPRYAR QQAARQWLAH DGVRAQDRTV SLLGLGALGK AAAQRLLSAG FQVRGWSRTP
RHMDGVQCHA GDAELPAMLA QTDILVCLLP LTPQTRGLVG AQALAALPAH ASLINFARGP
IVDDAALRAA LDGGRLAHAV LDVFEQEPLP EASWQWAHPA VTVLPHISAP TDRATASAIV
AGNIRRWRAS GELPQAVDAA RGY
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