Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5590 |
Symbol | |
ID | 5751210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6216328 |
End bp | 6217260 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641300723 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001566604 |
Protein GI | 160901022 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.651891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC CACGCCGCCG CACACCCCGC CAGCGTCACC CTGAACTGGA GCGCGATTTC GTGCGGACGC CCGCGCTGGG CTATGAGGAT ATGGAGGGCA GTGGCCTGGT GCGCTGCCTG GCACATGGTT TCCCGAGCCC CCTGGTGCGC TGGCATTTCC ATGAGGAGTA CGAGCTGCAC CTCATCACCC ACACCTCGGG CCGCGCCTTC GTGGGAGACT GGATAGGACC CTTCGAGCCC GGCCACCTCG TGCTGTGCGG CCCGCGCCTG CCGCACAACT GGATCTCGTT CGATGCGCCC GATGGGGGCT CGCCTGCACG CGATTACGTG ATTCTTTTCA ACCACGACCC CATCGCCCGT GCGGCCGAGC AGATCCCGGA GATGCGCGAG GTGCTTCAAC TGCTGGACCG TGCGCGCCAT GGCATCGAGT TCTTCGGCTT GGCGCAGACG GCGCGCGCGC ACTGGGATGC GGTCAGGAGT GCGCGCGGAA TGCGCCGCTT CACGGCCTTT TGCGCGCTGC TGTCCGATCT GGCCGAGTGC ACCGACTACC GGCTGCTGTC AGCCGTGCAG ATGCAGGGCG CCCAGGGCGA GGCTCAGGTG GATCAGATCA ACGAGGTGGT CAACCGCATC ATGGCGCGCG TGAGCGAGCC GCTGAGCCTG GCCGACGTGG CGGCCGAGCT GGGCATGAGC GAGAGCCGCT TCAGCCGCTT TTTCCGCCGG GCCACGGGCA ACAGCTTCAC CGACTTCGTC AGCCGGGTAC GCATCAACAG CGCATGCCAC CTGCTCATGC AGACCGACAG CTTCATCGCC GACATCTGCT ACCAGGTGGG CTTCAACAAC GTGGCCAACT TCAACAGGCG CTTCCTGGAG ATCAAGGGCA TGACGCCCTC GGAGTTCCGC CGCCAGGCGG ACAGCCGCTT CGGCGCGGGT TGA
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Protein sequence | MTSPRRRTPR QRHPELERDF VRTPALGYED MEGSGLVRCL AHGFPSPLVR WHFHEEYELH LITHTSGRAF VGDWIGPFEP GHLVLCGPRL PHNWISFDAP DGGSPARDYV ILFNHDPIAR AAEQIPEMRE VLQLLDRARH GIEFFGLAQT ARAHWDAVRS ARGMRRFTAF CALLSDLAEC TDYRLLSAVQ MQGAQGEAQV DQINEVVNRI MARVSEPLSL ADVAAELGMS ESRFSRFFRR ATGNSFTDFV SRVRINSACH LLMQTDSFIA DICYQVGFNN VANFNRRFLE IKGMTPSEFR RQADSRFGAG
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