Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5574 |
Symbol | aroB |
ID | 5751194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6197128 |
End bp | 6198246 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300707 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_001566588 |
Protein GI | 160901006 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.751857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCACCG CTTCCTCCTT GCCTGCCGCC CAGGTCGTGA CCATTGACCT GGGTGACCGT TCCTATCCGA TCACCATCGG CACCGGCCTC CTGGACCAAG CCGCGACCTA TGCCGCCCTG CCTTCTGCGG CCCAGGCCGT GATCGTCAGC AATGATGTGG TCGCACCGCT CTATGAGCCC GCACTGCGCC GCGTGCTGGA ACAACGCTAC CGCAGCGTAC GTACCGTGGT GCTGCCCGAT GGCGAGGCCC ACAAGGACTG GCAGACGCTG AACCTGATTT TTGACGACCT GTTGTCCGGC GGCTGCGACC GCAAGACCGT GCTGTTTGCG CTGGGCGGCG GCGTCATCGG CGACATGACG GGCTTTGCCG CCGCCAGCTA TATGCGCGGC GTGCCCTTCG TGCAGGTGCC CACCACGCTG CTGTCGCAGG TGGACTCGTC GGTGGGCGGC AAGACCGCCA TCAACCATCC GCTGGGCAAG AACATGATCG GCGCCTTCTA CCAGCCGCAG CTGGTGGTTT GCGACCTGGC TTCGCTGGAC ACGCTGCCCG TGCGCGAGCT GAGCGCCGGC CTGGCCGAGG TCATCAAGTA CGGGCCGATC GCCGACATGG ACTTCCTGGC CTGGCTGGAG GAGAACATGG ACGCCTTGCT TGCCCGCGAC CGCACGGCAC TGGCGCACGC GATCAAGCGC AGCGTGGAGA TCAAGGCCTG GGTCGTGGGC CAGGACGAGA AAGAGGCTGG GCTGCGCGCC ATTCTCAATT TCGGCCACAC CTTCGGGCAT GCGATCGAAG CCGGCATGGG CTACGGCAAC TGGCTGCACG GCGAAGGCGT GGGCGCCGGC ATGGTCATGG CGGCCGAGCT GTCGCAGCGC CTTGGCCTGG TGGATGCTGC CTTCGTGCAG AGGTTGCGTG TGCTGATCGC GCGTGCGGGC CTGCCCGTGC GTGGCGCCGT CCTGGACGAA GCCGACAACG CTGGCCGCTA TCTGGAGCTG ATGCGCGTGG ACAAGAAGTC CGAGGCGGGC GAGATCCGCT TCGTTCTCAT CGACGGGCCG GGAAAGGCCG TCATGCGCTC GGCGCCCGAC GCGCTGGTGC GCGAGGTCAT CAACGCCTGC TGCGCCTGA
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Protein sequence | MPTASSLPAA QVVTIDLGDR SYPITIGTGL LDQAATYAAL PSAAQAVIVS NDVVAPLYEP ALRRVLEQRY RSVRTVVLPD GEAHKDWQTL NLIFDDLLSG GCDRKTVLFA LGGGVIGDMT GFAAASYMRG VPFVQVPTTL LSQVDSSVGG KTAINHPLGK NMIGAFYQPQ LVVCDLASLD TLPVRELSAG LAEVIKYGPI ADMDFLAWLE ENMDALLARD RTALAHAIKR SVEIKAWVVG QDEKEAGLRA ILNFGHTFGH AIEAGMGYGN WLHGEGVGAG MVMAAELSQR LGLVDAAFVQ RLRVLIARAG LPVRGAVLDE ADNAGRYLEL MRVDKKSEAG EIRFVLIDGP GKAVMRSAPD ALVREVINAC CA
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