Gene Daci_5536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5536 
Symbol 
ID5751156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6150759 
End bp6151688 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content67% 
IMG OID641300669 
ProductABC transporter related 
Protein accessionYP_001566550 
Protein GI160900968 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCT CGTGGGGTGG TGAGCAGGCA GCAGCGCCTG TCTGCACAAT AGCGGCCTTG 
CCAGCGAACA TTTATCGACC GCACCACAGC ATGATCCCAA CCGCCTCTTT CGTGGAGTTG
CGCAACGTCA CCTTCGGCTA TGGCGAACGT GTGATCCTGC GCGACCTGTC GCTGCAGGTG
CCGCGCGGCA AGGTCACGGC CCTGATGGGG GCATCGGGCG GCGGCAAGAC CACGGTGCTT
CGCCTGATCG GCGGCCAGCA GCATGCCCAG CAGGGGCAGG TGCTGTTCGA TGGCAAGGAC
GTCACCACCA TGGACGCCGC AGGCCTGTAC GCCGCGCGCC GGCGCATGGG CATGCTGTTC
CAGTTCGGCG CGCTGTTCAC CGACATGAGC GTGTTCGACA ACGTGGCCTT CCCGCTGCGC
GAGCACACCG ATCTTCCCGA CGAACTGGTC CGCGACATCG TGCTCATGAA GCTGCATGCC
GTGGGCCTGC GCGGTGCGCG CGACCTCATG CCCAGCGAGA TCTCGGGCGG CATGGCCCGC
CGCGTGGCGC TGGCGCGGGC CATTGCGCTG GACCCCGAAC TGATCATGTA CGACGAGCCC
TTCGCCGGGC TGGACCCCAT CTCCCTGGGC ACGGCCGCCC AGCTGATCCG CGAGCTCAAC
GACGCCATGG GACTGACCTC CATCCTGGTG TCCCATGACG TGGAGGAAAC CTTCCACGTG
GCCGACCATG TGGTCATCCT GGGCAACGGC GGCGTCGCCG CCCAGGGCTC GCCAGATGAG
GTGCGGGCCA ATCCCGACCC GCTGGTGCAG CAGTTCATCC ACGCACGGGC CACCGGTCCC
GTGCCTTTCC ACTACCCCGG CGTGAGCGCC GAGGAAGATT TCGGCAACCC CGCAAGCTCC
GGCAAGAGCA ACGGCAGGAG GCACGCATGA
 
Protein sequence
MFISWGGEQA AAPVCTIAAL PANIYRPHHS MIPTASFVEL RNVTFGYGER VILRDLSLQV 
PRGKVTALMG ASGGGKTTVL RLIGGQQHAQ QGQVLFDGKD VTTMDAAGLY AARRRMGMLF
QFGALFTDMS VFDNVAFPLR EHTDLPDELV RDIVLMKLHA VGLRGARDLM PSEISGGMAR
RVALARAIAL DPELIMYDEP FAGLDPISLG TAAQLIRELN DAMGLTSILV SHDVEETFHV
ADHVVILGNG GVAAQGSPDE VRANPDPLVQ QFIHARATGP VPFHYPGVSA EEDFGNPASS
GKSNGRRHA