Gene Daci_5477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5477 
Symbol 
ID5751095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6081526 
End bp6082395 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID641300608 
Productprotein-(glutamine-N5) methyltransferase, release factor-specific 
Protein accessionYP_001566491 
Protein GI160900909 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATC CCACCATCGT CAAAGAAGCG CTGCAGCAGG CCCAGGCCCT GGGGCTTGCG 
CGCATCGACG CGCAAATGCT GCTGCTGCAC GTGCTCGGGC GCCAGTCTGG CGGCCGCGCC
TGGCTGCTGA CCCATGACGA GGACATGCTG ACCGCCCCCC AGGCCGAGGC CTATGCCACG
CTGTGCGCAC GCCGCCTTGG CACGGAACCC GTTGCCTACC TGCTCGGCCA CAAGGAGTTC
TACGGGCTCG ATCTGGCCGT GGACGCGCGT GTGCTCGACC CACGCCCCGA CACCGAGACC
CTGGTGGACT GGGCGCTGGA GCTCATGCCT GCCCAGTCCC AGGCAGCCCG CGCTTGCCGC
GTGGTGGACC TGGGCACCGG CAGCGGCGCC ATAGCCCTGG CCCTGCAAAG CCAGCGCCCC
GGCGCCACCG TCTGGGCCGT GGATGCCAGC GCCGACGCAC TGGCCGTGGC CAGCGCCAAT
GCCACGCGCC TGCAACTGGG CGTGCAGTTC GCGCATGGCA GCTGGCTCCA GCCGCTGGCA
GGGCAGGCAC CGTTCGACCT CATCGTCAGC AACCCGCCCT ATATCCGCGA CGACGATCCG
CACCTGCAGG CCTTGGCGCA TGAGCCGCTG TCGGCGCTGG CCAGCGGTGC CGATGGCCTG
GTTGATATCC GCGCCATCAT CACCCAGGCG CCCGCGCTGC TGGTCCGCGG CGGCTGGCTG
CTGATGGAGC ATGGCTGGGA CCAGGCCGAT GCCGTGGCCG CCCTGCTGCG CCATGCCGGC
TTTGGCGACG TGCAGCATCG CCACGACCTG GGCGGCATTG CCCGCTGCAC GGGCGGGCAA
TGGCAAGGGC AGGCCAGCGC TCTGACCTGA
 
Protein sequence
MPNPTIVKEA LQQAQALGLA RIDAQMLLLH VLGRQSGGRA WLLTHDEDML TAPQAEAYAT 
LCARRLGTEP VAYLLGHKEF YGLDLAVDAR VLDPRPDTET LVDWALELMP AQSQAARACR
VVDLGTGSGA IALALQSQRP GATVWAVDAS ADALAVASAN ATRLQLGVQF AHGSWLQPLA
GQAPFDLIVS NPPYIRDDDP HLQALAHEPL SALASGADGL VDIRAIITQA PALLVRGGWL
LMEHGWDQAD AVAALLRHAG FGDVQHRHDL GGIARCTGGQ WQGQASALT