Gene Daci_5472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5472 
Symbol 
ID5751090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6076466 
End bp6077458 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content66% 
IMG OID641300603 
Producthypothetical protein 
Protein accessionYP_001566486 
Protein GI160900904 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGC GCCGCACCCT GTTGTCCAGC CTGGCCGCCT GCGCCGCCAC TGCTCTTTTG 
GCTCCCGTCG CCTGGGCCCA GGGCCCGGCT GCCGACTATC CCAGCCGGCC GATCCGCCTG
GTCGTGCCGT TTGGTGCGGG CGGCTCCACC GACATGGTGG CGCGTCTGCT GGCCGAGAAG
ATGAGCGTGA TCCTGGGCAA GTCCGTGGTG GTGGACAACC GGGGCGGGGC GGGCGGCTCC
ATTGGCGCCT CCGAAATTGC GCGTGCTGCG GCCGATGGCT ACACCATCGG CATGGCCACG
GTGAGCACGC ATGGCTCCAA CCCGGCCATC TTCCGCAAGC TGCCCTACGA CCCGATCAAG
GACTTCGCGC CCATCACCAA TGTGATGTCC GTGCCCAGCG TGTTCGTGAT CAACGCCAGC
GTGCCCGCCA AGACCATGAA GGAGTTCATC GCCCTGGCCA AGGCCAACCC GGGCAAGTAC
AGCTTTGCCT CGCCGGGCAC AGGTTCCCTG GGCCACGCCA ACATCGAGAA TTTCATGAAC
CTGGCCGGTA TCGACCTGCT GCACATCCCC TACAAGGGCG CGGGCCAGGC CATCACCGAC
GCGCTGGGCG GCCAGGTCAA TGCCATGACG GACAACCTGC CCTCCACGCT GCCCCACATC
AAGGACGGCA AGCTGCGCCC GCTGGCCGTG CTGGCCTTCA AGCGCGCCGA CGTGCTGCCC
GACGTGCCCA CCTACACCGA GCTGGGCTTC CCGCAGATGG GCGACGGCGG CTGGTTCGGC
CTGGTCGCAC CTGCCGGCAC GCCGCGCCCC ATCATCGACA AGCTCAATGC GGCTGCGCAC
AAGGCCATGG CCATGCCTGA CTACCTGGAA AAGCAAAAAT CCATCTCGGG CGAGTCCATG
GGCAACACGC CCGAGGAATT TGCCAAGCAG ATCAAGGCTG CCATCGAGCG CTACACGGCC
GTGGCCAAGC GCGCCAACAT CAAGCTCGAC TGA
 
Protein sequence
MAMRRTLLSS LAACAATALL APVAWAQGPA ADYPSRPIRL VVPFGAGGST DMVARLLAEK 
MSVILGKSVV VDNRGGAGGS IGASEIARAA ADGYTIGMAT VSTHGSNPAI FRKLPYDPIK
DFAPITNVMS VPSVFVINAS VPAKTMKEFI ALAKANPGKY SFASPGTGSL GHANIENFMN
LAGIDLLHIP YKGAGQAITD ALGGQVNAMT DNLPSTLPHI KDGKLRPLAV LAFKRADVLP
DVPTYTELGF PQMGDGGWFG LVAPAGTPRP IIDKLNAAAH KAMAMPDYLE KQKSISGESM
GNTPEEFAKQ IKAAIERYTA VAKRANIKLD