| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5463 |
|---|
| Symbol | |
|---|
| ID | 5751081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6063078 |
|---|
| End bp | 6063533 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641300594 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001566477 |
|---|
| Protein GI | 160900895 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.189443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTC CCGCTTCCTG CCCCCTGTGC GCCACAGAAG GCGGCGTGCC CATCTGGCGC
GGCCCGCGCC TGCGAGTGAT CCGCGCGCAG GAGGAGGGCT TTCCGGCCTT CTATCGCGTG
GTCTGGAATG CGCATGCAGC CGAGTTCTCC GACCTGGACG CCGCCGACCG CCAGCACTGC
ATGGATGCCG TGGTCGTTGT CGAGCGCGTC TTGCGTGAGC GCCTTGCTCC GGCCAAGATC
AACCTGGCGG CGCTGGGCAA CATGGTGCCG CACCTGCACT GGCATGTGAT TGCGCGCTTT
GACTGGGACA GCCATTTCCC GGGCGCGGTC TGGGCCCCGG CCCAGCGCCC GCGCAATGGC
GAGCGCGAGG CCGAGGTGGC AGCGCGCTTG CCAGCCATAG ACACGGCGCT GGTCCAGGCA
CTCGATGCCT GGCAGCAGCA CCCCGCCACT GAATGA
|
|---|
| Protein sequence | MAAPASCPLC ATEGGVPIWR GPRLRVIRAQ EEGFPAFYRV VWNAHAAEFS DLDAADRQHC
MDAVVVVERV LRERLAPAKI NLAALGNMVP HLHWHVIARF DWDSHFPGAV WAPAQRPRNG
EREAEVAARL PAIDTALVQA LDAWQQHPAT E
|
|---|
| |