| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5421 |
|---|
| Symbol | |
|---|
| ID | 5751038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6018263 |
|---|
| End bp | 6020038 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641300551 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_001566435 |
|---|
| Protein GI | 160900853 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCA AGCGCATCGT TCTGCGCGAC TTCGTGATCG TGCAGGCACT GGATCTGGAC
TGGCATGCGG GCTTCACCGT GCTGACCGGC GAGACCGGCG CCGGCAAATC CATCCTGATC
GACGCATTGC AGCTGGCCCT GGGCGCCCGC GCCGACGCCG ACGTGGTGCG CGAAGGCTGC
ACCCAGGCCG ACATCTGCGT GGAGTTCGAC GGCTGCGCGC GGCTGCGCCC CTGGCTGGAG
GCCGCAGGCC TGGCCTGCGA GGACAGCAGC CTGCTGCTGC GGCGCACGGT GGACATCCAG
GGCCGCAGCC GCGCCTGGAT CAACGGCACG CCGGCCACGG CCACGCAGCT GCGCGCCCTG
GGTGAGCAGC TGATCGACAT CCACGGCCAG CATGCCTGGC AAAGCCTCAC GCGGCCCGAT
GCGGCGCGCG CGCTGCTGGA CGCCTATGCC GGCATCGACA GCCGCGAGGT CCAGGGCTGC
TGGAGCCGTT GGTCCCAGGC CCGGCAGGCG CTGCAGCATG CGCAATCCGC CCAGGACAGC
CTGCAGCGCG AGCGCGAGCG GCTGCAGTGG CAGATCACCG AACTCGACAA GCTGGCCCCG
CAGGCCGACG AGTGGGACGA GCTCAATGCC CAGCACACGC GCCTGTCCCA TGCCCAGACC
CTGATCGACA CCGCCCAGAC CACGCTGCAG ATGCTGGAGG ACGACGAGGC CGGCGTGATC
ACTCCGCTGG GCCGCGCCAG CCACCTGATC CAGAACCAGG AGCACCTGGA GCCCGACTTC
CAGAACATTG CCGACGTGCT GGCCTCATGC ATGGCCCAGG CGCAGGATGC GCGCCATTCG
CTGCAAAGCT ATCTGCGCCG CGCCGACCTG GACCCCGAGC GCCTGGCCGA GCTCGATGAA
CGCCTGTCGC TGTGGATGCA GCTGGCGCGC CGCTACCGCC GCACACCCGA TGAACTGCCG
GCACTGCTGG CCGGCTGGCG CCAGGAGCTG CAGCAGCTGG ACGCCGCCGT GGACATCGAG
GCCCTGCATG CGGCCGAGCA ATCGGCGCAG CAGCACTACC AGGCCAGCGC CCGGGTGCTG
TCGCAGCAGC GCGCACTGGC TGCGCCGCGC CTGTCGCGCG CCATCACCCA GGCCATGCAG
GGCCTGGGCA TGGAAGGCGG CCTGTTCGAG GCCGCCCTGT CCACGGCCGA CTCCCCCGGT
GCCTTTGGCG TGGACAGCGT GGCCTTTCTG GTTGCCGGCC ATCCTGGGGC CAGTCCCAAG
CCGATTGCCA AGGTGGCGTC GGGCGGTGAG CTGTCGCGCA TTTCGCTGGC CATTGCCGTG
ACCACCAGCG AGCTGGGCGA GGCCGGCACG CTGATCTTCG ACGAGGTGGA CTCGGGCGTG
GGCGGCGCCG TCGCCGAGAC CGTGGGCCGC CTCATGCACG CACTGGGCCG ATCGCGGCAG
GTGCTGTCCG TCACCCACCT GCCGCAGGTT GCCGCCTGCG CCGACCAGCA CTACCTGGTG
GCCAAGCAGC GCGCAAGGCA AGGCACGCTC AGCACCGTGC AGCCGCTGGA CAGCGCCGCA
CGCGAGGCCG AGCTGGCGCG CATGCTGGGC GGCGAGCGCC AGTCCGAAAC CACGATGGCC
CATGCCCGCG AAATGCTGGC CATGGCGCGC CAGGCACCCG CGCCCCGCCC ACCCCCGCGA
CGGGCCGGCC GGCAGCGGCC CCAGGCCGAT GCCGACCGCA CACGGTCCAA GCCGGGACGC
GCGGCCAACG GCGCGCGCAA CACCAATGGA GGCTGA
|
|---|
| Protein sequence | MALKRIVLRD FVIVQALDLD WHAGFTVLTG ETGAGKSILI DALQLALGAR ADADVVREGC
TQADICVEFD GCARLRPWLE AAGLACEDSS LLLRRTVDIQ GRSRAWINGT PATATQLRAL
GEQLIDIHGQ HAWQSLTRPD AARALLDAYA GIDSREVQGC WSRWSQARQA LQHAQSAQDS
LQRERERLQW QITELDKLAP QADEWDELNA QHTRLSHAQT LIDTAQTTLQ MLEDDEAGVI
TPLGRASHLI QNQEHLEPDF QNIADVLASC MAQAQDARHS LQSYLRRADL DPERLAELDE
RLSLWMQLAR RYRRTPDELP ALLAGWRQEL QQLDAAVDIE ALHAAEQSAQ QHYQASARVL
SQQRALAAPR LSRAITQAMQ GLGMEGGLFE AALSTADSPG AFGVDSVAFL VAGHPGASPK
PIAKVASGGE LSRISLAIAV TTSELGEAGT LIFDEVDSGV GGAVAETVGR LMHALGRSRQ
VLSVTHLPQV AACADQHYLV AKQRARQGTL STVQPLDSAA REAELARMLG GERQSETTMA
HAREMLAMAR QAPAPRPPPR RAGRQRPQAD ADRTRSKPGR AANGARNTNG G
|
|---|
| |