Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5406 |
Symbol | |
ID | 5751021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6000062 |
End bp | 6001780 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641300534 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001566420 |
Protein GI | 160900838 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA TCCCCCGCGA GATCCCTGCA CAGCAGGCCT CGGCACTGCG CCAGGCCGGC GTCCACCCTC TGCTGGCCCA GCTCTACGCC GCACGCGGCG TGTGCTCCGC CGACGAACTG GACGACACGC CTGCACGCCT GCTGCCACCC TCGGGCCTGC TGGGCATGGA GGCCGCCGTG CGGCTGCTGG CCGATGCCAT AGAGCGCGGC CTGCGCCTGT GCATCGTGGC CGACTACGAC TGCGACGGCG CCACCGCCTG CGCCGTGGGC TGGCGCGGCC TGCGCATGCT GGGCGCGACC GAGGTCAGCT ACCTGGTGCC CGACCGCGTG GTGGACGGCT ACGGCCTGAC GCCGCCCATC GCACGCCGCG TCAAGGAAAC CGGCGCCGAG GTGATGGTCA CCGTGGACAA CGGCATTGCC AGCGTCGAAG GCGTGGCCGA GGCCAAGGCC CTGGGCCTTC AGGTGGTGGT CACCGACCAC CACCTGCCCG GCAACCACCT GCCGCTGGCC GATGCCATCG TCAACCCCAA CCAGCCCGGC TGCAGCTTCG AGAGCAAGTC CATGGCCGGT GTCGGCGTGA TGTTCTACGT GCTGCTGGCC CTGCGTGCCG AGTTGCGCGC GCGCGGCCGC TTCGACAAGG CCAGCCAGCC CCGGCTGGAG GCCCTGCTGC CCCTGGTCGC CCTGGGCACG GTGGCCGACG TGGTCCGGCT GGACGCCAAC AACCGCCGCC TGGTCGCCCT GGGCCTGAAG CAGATCCGCC GTGGCCAGAT GCAGCCGGGC CTGCTGGCCC TGTTCGAAGC CGCTGGCCGC AAGGCCTTTG CGGCCACCAC GTTCGACTTC GGCTTTGCCC TGGGCCCGCG CATCAATGCC GCAGGCCGGC TGTCCGACAT GACCATCGGC ATCGAGTGCC TGACCACGGA CGATGCGGGC CGCGCCGCCA ACCTGGCGCA GATGCTGGAC GCCATCAACC GCGAACGCCG CGAACTGGAA GGCGGCATGC GCGAGCAGGC CCTGCTCATG GCCGAAGGCC TGTGCGAGGA CGGCATGACG CCGCCGGCGG CCATCAGCGT GTTCGACCCC GACTTCCACG AGGGCGTGGT CGGCATCGTG GCCTCGCGCA TCAAGGACCG CATGCACCGG CCCAGCTTCG TCTTCGCCGC CAGCGGCGCG CCGGGGCACG AGCATGAACT CAAAGGCTCG GGCCGCTCCA TTCCCGGCTT TCACCTGCGC GACGCGCTGG ACCTCGTATC CAAGCGCCAC CCCGGCCTGC TGCTGCGCTT TGGCGGCCAC GCCATGGCGG CCGGCTGCAC CATTGCCGAG GCCGGTTTCG CGGTGTTCGA AAAGGCCCTG GCCCAGGTGG CACAGGAATG GCTGGACGCG GCCACGCTGA CGCGCCGCAT AGAGACCGAC GGACCGCTGG ACCCGGATTT CCGCAAGCCC GAAATGGTCG AGCAGCTCAA TCTCGCGGTC TGGGGCCAGG GCTTTGCCCC GCCCACCTTC AGCGAGCAAC TGGAAGTGCT CTCACAGCGC CTGGTCGGTG AAAAGCACCT GAAACTGCAA TTGCGCCATC AGGGCGAAAC CGTGGACGGA ATCTGGTTCG GCCATACCGA CCCGCTGCCG CCATCGGCCT GCATTGCCTT TCGCATGGAC ATCAATGAAT GGCGCGGAGA GCGCAAGGTG CAATTCCTGA TCGAGGGAGT GCATTCGGAC GCGTCCTAG
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Protein sequence | MKIIPREIPA QQASALRQAG VHPLLAQLYA ARGVCSADEL DDTPARLLPP SGLLGMEAAV RLLADAIERG LRLCIVADYD CDGATACAVG WRGLRMLGAT EVSYLVPDRV VDGYGLTPPI ARRVKETGAE VMVTVDNGIA SVEGVAEAKA LGLQVVVTDH HLPGNHLPLA DAIVNPNQPG CSFESKSMAG VGVMFYVLLA LRAELRARGR FDKASQPRLE ALLPLVALGT VADVVRLDAN NRRLVALGLK QIRRGQMQPG LLALFEAAGR KAFAATTFDF GFALGPRINA AGRLSDMTIG IECLTTDDAG RAANLAQMLD AINRERRELE GGMREQALLM AEGLCEDGMT PPAAISVFDP DFHEGVVGIV ASRIKDRMHR PSFVFAASGA PGHEHELKGS GRSIPGFHLR DALDLVSKRH PGLLLRFGGH AMAAGCTIAE AGFAVFEKAL AQVAQEWLDA ATLTRRIETD GPLDPDFRKP EMVEQLNLAV WGQGFAPPTF SEQLEVLSQR LVGEKHLKLQ LRHQGETVDG IWFGHTDPLP PSACIAFRMD INEWRGERKV QFLIEGVHSD AS
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