Gene Daci_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5388 
Symbol 
ID5751003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5978467 
End bp5979447 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID641300516 
Productalcohol dehydrogenase 
Protein accessionYP_001566402 
Protein GI160900820 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.497485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTG CAGTGCAGAT CCGCCACAAC GGCGGCCCCG AAGTCCTGGA GCTGGTGCAG 
GTCGCCGTGG GCGAGCCCGG GCCAGGCGAG GTACGCATAC GCCACCATGC GGTGGGCCTG
AACTTCATCG ATGTGTACCA GCGCTCCGGC CTGTACTCGC TGCCCATGCC CTTGAGCCTG
GGCATGGAAG GCGCAGGCGT GGTCGAGGCC GTGGGGGCCG GCGTGGAGCA CCTGTGCGTG
GGCGACCGCG TGGCCTATGC CAGCAATCCA CCGGGCAGCT ACAGCGAGGT GCGCGTCATG
CCCGCCATGT GCGTGTGCCG CCTGCCCGAT GCCATTGCGT TCGAGACGGC TGCCGCCATG
ATGCTCAAGG GCCTGACCGC CCAGTACCTG CTCAAGAAAT GCATTCCGGT CGAGGGCCTG
GCACCGGGTG ATGCCGTGCT GTTCCATGCG GCGGCCGGTG GCGTGGGCCT GATCGCCTGC
CAATGGGCCA GGGCCCTGGG CCTGCAGCTC ATCGCCACCG CGGGCTCGGA CGAGAAGTGC
GCGCTGGCCC TGGCCAACGG TGCAGCCCAT GCCATCAACT ACCGCAGCGA GAACTTCGCC
GAGCGCGTGC AGGAGATCAC GGGCGGCCAG GGTGTGAAGG TGGTCTACGA CAGCGTGGGC
AAGGACACAT GGGAAGGCTC GCTGGCCTGC CTGCGGCGCT TCGGCCTGTT GGTGAGCTTC
GGCAACGCCT CGGGCCCCGT GGCGCCTTTC GCTCCTGCCG TGCTCGCGGC CAAGTCGCTG
TATGTGACGC GCCAGACCCT GTTCTCCCAC ATCACCAGCC GCGAGGCCAC CCAGGCGATG
GCCGACGATC TGTTCGCCGT GGTGGAAAGC GGTGCCGTGA AGATCCATAT CGACCAGCGC
TATCCGCTGG CCGAGGTGCG CCAGGCCCAC CTGGACCTGG AGGCGCGCAA GACCACCGGC
TCGACCATCC TGCTGCCATG A
 
Protein sequence
MGIAVQIRHN GGPEVLELVQ VAVGEPGPGE VRIRHHAVGL NFIDVYQRSG LYSLPMPLSL 
GMEGAGVVEA VGAGVEHLCV GDRVAYASNP PGSYSEVRVM PAMCVCRLPD AIAFETAAAM
MLKGLTAQYL LKKCIPVEGL APGDAVLFHA AAGGVGLIAC QWARALGLQL IATAGSDEKC
ALALANGAAH AINYRSENFA ERVQEITGGQ GVKVVYDSVG KDTWEGSLAC LRRFGLLVSF
GNASGPVAPF APAVLAAKSL YVTRQTLFSH ITSREATQAM ADDLFAVVES GAVKIHIDQR
YPLAEVRQAH LDLEARKTTG STILLP