| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5360 |
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| Symbol | |
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| ID | 5750975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5943945 |
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| End bp | 5945258 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300488 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001566374 |
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| Protein GI | 160900792 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.256076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC TCAAGACCCG GGACCTTATC GCCCTAGGCT TCATGACCTT TGCGCTGTTC
CTCGGCGCGG GCAACATCAT CTTTCCGCCC ATGGTCGGCC AGGGCGCCGG CGAGCACGCG
GCCGCTGCGG CCACGGGCTT TCTGCTCACG GGCGTGGGCC TGCCGTTGCT CACCGTGGTG
GCGCTGGCGC GCGTGGGCGG CGGGCTCGAT GCGCTGACCT CGCCCGTGGG CCGCAAGGCA
GGCATGGTGC TGGGCCTGCT GATCTATCTC ATCCTCGGCC CGCTGTTTGC CACGCCGCGC
ACGGCCACCG TGTCGTTCGA GATGGGCTTT GCGCCCTTCG TGGGCCACAG CAGCACTGCG
CTGTTCATCT ACTCGGCGGT GTACTTTATG CTGGTCATGG GCCTGTCCCT GTTCCCCGGC
AAGCTGATCG ACACCATCGG CAAGCTGATC ACGCCCGTGC TGATCCTGGC CCTGGTGGTG
CTGGGTGCTG CCGCCGTGCT GCTGCCGGCC GGTGCCGCCA CCAGCGCCAG CGGCGACTAT
CTGGTCGCGC CCCTGACCGA AGGGTTTCTG GAGGGCTACC AGACCATGGA CGCGCTGGGC
GCCCTGGCCT TCGGCATCGT CATCGTCAAC GCCATCCGGG ACCGGGGCAT CTCCCACACC
GGGCTGCAGA CGCGCTACGC CATCATCGCG GGCGTGATCG CGGCCGTGGG CCTGGGTCTG
GTGTATCTGT CGCTGATCCA TCTGGGCGCC ACCAGCCAGT CCATCGCCCC GCAGGCGCAG
ACCGGCGTGC TCATCCTCAC GCGCTACGTG GATCACACCT TCGGCCCCAT CGGCAGCCTG
CTGCTGGCCG TGGTGATTTC CCTGGCCTGC CTGACCACGG CCGTGGGCCT GGTCAGCGCC
TGTGGCGCCT ACTTCAGCGA GATGCTGCGC CTGCCCTACC GCGCGGTGGT GGTGGCCATT
GGGCTGGCGT GCATCCTGGT GTCCAACCAG GGCCTGGCCC AGCTGATCGC CCTGTCCGGC
CCCGTGCTGG TGGGCATTTA TCCGCTGGCC ATCGCCCTGG TGGTGTTGAG CCTGCTGTCA
GGCCTGTGGC GCAATGCGCA GCGCGTGTTC GCGCCGGTGC TGGCCGTGGC GCTGGTGTTC
GGTCTTGTCG ATGCCGCCAA GGCGGCCGGC TGGCAGGACT GGCTGCCGGC CTTCCTGAAC
AGCTTGCCGG GCAACGGCAT GGGCTGGGCC CTGCCCGTGG CAGCCACCCT GGTGCTGGCG
GCGCTCCACG ACCGGCTGCG CCCGGCCCCG GCCAACGCGT TCAGGCCGTC CTGA
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| Protein sequence | MQTLKTRDLI ALGFMTFALF LGAGNIIFPP MVGQGAGEHA AAAATGFLLT GVGLPLLTVV
ALARVGGGLD ALTSPVGRKA GMVLGLLIYL ILGPLFATPR TATVSFEMGF APFVGHSSTA
LFIYSAVYFM LVMGLSLFPG KLIDTIGKLI TPVLILALVV LGAAAVLLPA GAATSASGDY
LVAPLTEGFL EGYQTMDALG ALAFGIVIVN AIRDRGISHT GLQTRYAIIA GVIAAVGLGL
VYLSLIHLGA TSQSIAPQAQ TGVLILTRYV DHTFGPIGSL LLAVVISLAC LTTAVGLVSA
CGAYFSEMLR LPYRAVVVAI GLACILVSNQ GLAQLIALSG PVLVGIYPLA IALVVLSLLS
GLWRNAQRVF APVLAVALVF GLVDAAKAAG WQDWLPAFLN SLPGNGMGWA LPVAATLVLA
ALHDRLRPAP ANAFRPS
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