Gene Daci_5356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5356 
Symbol 
ID5750971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5940210 
End bp5940815 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID641300484 
ProductDSBA oxidoreductase 
Protein accessionYP_001566370 
Protein GI160900788 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.615074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.90574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA ACGTGCAATT TCTCTTCGAC TTCGGCAGCC CCAACGCCTA TCTCTGCCAC 
CAGGTCATCC CCGCAATCGA GGCGCGCAGC GGCATCCGCT TCGACTATGT GCCGGTCCTG
CTGGGCGGCC TGTTCAAGCT GGCCAACAAC CGCTCACCGG CCGAGGCGAA TGCCGATATT
CCCAACAAGC GCGCCTATGA GGCGCTGGAG CTGCAGCGTT TCGTGCAAAG GCATGGGCTC
ACGCGCTTCC GGATGAATCC GCACTTTCCC GTCAACACCC TGCAGATCAT GCGCGGGGCC
GTGGCGGCGC AGGGCCTGGG CTGCTTCGAG CGTTATGTGG ATGCGGTGTT CTCCAGCATG
TGGGAGAAGG GCTGCAAGAT GGACGACGCC CAGGTGATCG GCACCGAGCT GTCCGGGGCG
GGCCTGGACG CCCCAGCCCT GATCGCCGCA AGCCAGACGC CCGAAGTCAA GGCCCGGCTG
CTGGCAAATA CCGAGCAGGC CTTCCACCGT GGCGCTTTCG GATCGCCCAC CTTTTTTGTT
GGCGACGAGA TCTACTTCGG CAAGGACCGC CTGCGCGATG TGGAGGAACA AGCGCTGCGG
GCCTGA
 
Protein sequence
MKPNVQFLFD FGSPNAYLCH QVIPAIEARS GIRFDYVPVL LGGLFKLANN RSPAEANADI 
PNKRAYEALE LQRFVQRHGL TRFRMNPHFP VNTLQIMRGA VAAQGLGCFE RYVDAVFSSM
WEKGCKMDDA QVIGTELSGA GLDAPALIAA SQTPEVKARL LANTEQAFHR GAFGSPTFFV
GDEIYFGKDR LRDVEEQALR A