Gene Daci_5299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5299 
Symbol 
ID5750911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5869833 
End bp5870516 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID641300424 
ProductTetR family transcriptional regulator 
Protein accessionYP_001566313 
Protein GI160900731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA GCACCGATGA CACCGCGGCC GAGGAACCCC GCACCCAGGC CCGCGAACGC 
CTTCTGCAAG CCGCCGAGCA GCTGTTTGCG CGGCATGGCT ACGCGGGCAC GTCGCTGCGC
GCCGTCATGG CGCTGGCCGA GGTGGACACG GGCGCCATCC ACTACCACTT CCGCAACAAG
CTGGGCCTGC TAAAGGCCTT GTTCGAGCAG CGCGTGATGG CCGTCAACGG ACAGCGCCAT
GCACTGCTGC AAAGGCTGGA GCAGCAGTCG CCGCAGCCCG CCGTGGAGGA CATTCTTCGG
GCCTTCATCG CCCCTGCGCT GCGCGCCGCC CACAGCGAGG GCGAGGCCGA CTTCAACCGC
GTCACGGCCC TGTGCTCGGT CGATCCCGAC CAGGCAGTCA GGGAGGTGGT GTTTGCCGCC
TACGACGAGG CTGCCAAACG CTTTGCGGCC CTGCTGCGCC AGGCTCTGCC GCAGCTGTCG
CAGCACGATT TCCAGTGGCG CCTGGAATGC ATGTACGGCG CCATGATGTA CATCCGCTCC
GACAACGGCC GAGTCAGCCG CATGCTGGGC GGCGGCCACC GCGCCGACCC CGTGGAGCAT
GTGATCGACG AGCTGGTGGC CTTCACTGCG GCGGGCTTCC GTGCGGCGGG CATCCGTGCG
GCGGCCCCCC GCGCGGCGCA GTGA
 
Protein sequence
MTSSTDDTAA EEPRTQARER LLQAAEQLFA RHGYAGTSLR AVMALAEVDT GAIHYHFRNK 
LGLLKALFEQ RVMAVNGQRH ALLQRLEQQS PQPAVEDILR AFIAPALRAA HSEGEADFNR
VTALCSVDPD QAVREVVFAA YDEAAKRFAA LLRQALPQLS QHDFQWRLEC MYGAMMYIRS
DNGRVSRMLG GGHRADPVEH VIDELVAFTA AGFRAAGIRA AAPRAAQ