Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5299 |
Symbol | |
ID | 5750911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5869833 |
End bp | 5870516 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641300424 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001566313 |
Protein GI | 160900731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCA GCACCGATGA CACCGCGGCC GAGGAACCCC GCACCCAGGC CCGCGAACGC CTTCTGCAAG CCGCCGAGCA GCTGTTTGCG CGGCATGGCT ACGCGGGCAC GTCGCTGCGC GCCGTCATGG CGCTGGCCGA GGTGGACACG GGCGCCATCC ACTACCACTT CCGCAACAAG CTGGGCCTGC TAAAGGCCTT GTTCGAGCAG CGCGTGATGG CCGTCAACGG ACAGCGCCAT GCACTGCTGC AAAGGCTGGA GCAGCAGTCG CCGCAGCCCG CCGTGGAGGA CATTCTTCGG GCCTTCATCG CCCCTGCGCT GCGCGCCGCC CACAGCGAGG GCGAGGCCGA CTTCAACCGC GTCACGGCCC TGTGCTCGGT CGATCCCGAC CAGGCAGTCA GGGAGGTGGT GTTTGCCGCC TACGACGAGG CTGCCAAACG CTTTGCGGCC CTGCTGCGCC AGGCTCTGCC GCAGCTGTCG CAGCACGATT TCCAGTGGCG CCTGGAATGC ATGTACGGCG CCATGATGTA CATCCGCTCC GACAACGGCC GAGTCAGCCG CATGCTGGGC GGCGGCCACC GCGCCGACCC CGTGGAGCAT GTGATCGACG AGCTGGTGGC CTTCACTGCG GCGGGCTTCC GTGCGGCGGG CATCCGTGCG GCGGCCCCCC GCGCGGCGCA GTGA
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Protein sequence | MTSSTDDTAA EEPRTQARER LLQAAEQLFA RHGYAGTSLR AVMALAEVDT GAIHYHFRNK LGLLKALFEQ RVMAVNGQRH ALLQRLEQQS PQPAVEDILR AFIAPALRAA HSEGEADFNR VTALCSVDPD QAVREVVFAA YDEAAKRFAA LLRQALPQLS QHDFQWRLEC MYGAMMYIRS DNGRVSRMLG GGHRADPVEH VIDELVAFTA AGFRAAGIRA AAPRAAQ
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