| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5286 |
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| Symbol | |
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| ID | 5750898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5854425 |
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| End bp | 5855984 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300411 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001566300 |
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| Protein GI | 160900718 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.982796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGA ATTTGCCCGT CAGCCAGCTC AACTACGACT TTCCGGGCGA TGAGCTGCTG
GTATCCGTCA CCAACACCAA GGGCGAGATC ACCCATTGCA ACCCGGCCTT CGTGCGGGTC
AGCGGCTATT CCTACGAGGA ACTGATCGAG CAGCCGCACA ACCTGATCCG CCACCCGGAC
ATGCCGGCCG CCGCCTTCAA GGACATGTGG CGCACCATCG CCCACGGCTA CCCGTGGACT
GCCCTGGTCA AGAACCGGCG CAAGAACGGC GACCACTACT GGGTGCGCGC CAACGTCACG
CCCATCATGG AAGGCGGCCG TCCGCGCGGC TACCTTTCGG TGCGCACCAA GCCCCGGCCG
GACGAGATCG AAGCCGCCGA AGCCCTCTAT GCCCGCATGC GCGCCGAAGC CGATGCCGGC
CAGGAAACCC TGCGACTGCG CGGCGGCGAA CTGCGCCGCC TGGGCCTGGC AGGCCTGTGG
GACCGCCGCA GCGACCTGGG CCTGACAGCC CGCATGGCGC TGATGCTGGG CGGCGTGGGC
CTGGCCGCCA TGCTGCCCGA CCTGCTGGGC TGGCAGGGCG CCGCAGCTTG GGGCACGCGC
CTGGCCGCCT TGCTGGCGGG GGGCAGCTTT GTGCTGTGGC GCTTCCAGCA GCGCTGCGTG
GCGGGCCTGG AACAGGCCAG CGGCTTTGCC GCCGACATTG CCAGCTGCCA GTTGGGCACC
AACATGCAGC ACGACTACAG CGGCCCCATG GGCGCCCTGA TGCAGCGGCT GCAGCAAATC
CAGATCAACC TGCGCGCCGT GGTCGGCGAC GTGCGCACCG AAATGCGCGG CTTTGCCACC
ACCGCCCACG AGATCGCCCA GGGCAGCTTC GACCTCGCGC AGCGCACAGA ATCCCAGGCC
ACCAGCCTTC AGCAGACGGC GGCCTCGATG GAAGAGATAT CAGGCACCGT GGCGCAGACC
GCCGACACGG CCCAGCTCAT GGCCCATGAA AGCGACCAGA GCCGCCAGGT TGCCGGCAAG
AGCGGCGCCG CCATCCAGGA AGTGGGCGCT GCCATGGAGC ACATCCGTGG CTCCTCGCGC
CGCATGGGCG AGATCATCGG CGTCATCGAA AGCATTGCCT TCCAGACCAA CCTGCTGGCC
CTGAATGCCG CCGTAGAAGC CGCACGCGCA GGTGAGCAGG GCCGCGGCTT TGCCGTCGTG
GCCGGCGAAG TGCGCGCCCT GGCCCAGCGC AGCGCCTCGG CCGCCAAGGA AATCAGCGGC
CTCATCAACC GCACCGTGGA CGGCATCAAC GACGGCAACG CCCGCATGGA CGCCGCAGGC
CGCACCATCG ACGGCATGGT CGACGCCGTG GGCCGCGTCA GCGACCTGGT CCACCAGATC
AGCATCGCCA CGCGTGAACA ATCCGTAGGC ATCGCCCAGG TCAACGACGC CGTGGCCCAG
CTGGACTCCG TCACCCAGCA AAACGCCGCC CTGGTCGAAC AATCGGCCGG CGCAGCCGGT
TCACTGCGCG CCAGCGCCCA GTCGCTGGAG CGGTCGCTGG AGGTGTTTAC GTTGCGGTGA
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| Protein sequence | MRVNLPVSQL NYDFPGDELL VSVTNTKGEI THCNPAFVRV SGYSYEELIE QPHNLIRHPD
MPAAAFKDMW RTIAHGYPWT ALVKNRRKNG DHYWVRANVT PIMEGGRPRG YLSVRTKPRP
DEIEAAEALY ARMRAEADAG QETLRLRGGE LRRLGLAGLW DRRSDLGLTA RMALMLGGVG
LAAMLPDLLG WQGAAAWGTR LAALLAGGSF VLWRFQQRCV AGLEQASGFA ADIASCQLGT
NMQHDYSGPM GALMQRLQQI QINLRAVVGD VRTEMRGFAT TAHEIAQGSF DLAQRTESQA
TSLQQTAASM EEISGTVAQT ADTAQLMAHE SDQSRQVAGK SGAAIQEVGA AMEHIRGSSR
RMGEIIGVIE SIAFQTNLLA LNAAVEAARA GEQGRGFAVV AGEVRALAQR SASAAKEISG
LINRTVDGIN DGNARMDAAG RTIDGMVDAV GRVSDLVHQI SIATREQSVG IAQVNDAVAQ
LDSVTQQNAA LVEQSAGAAG SLRASAQSLE RSLEVFTLR
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