Gene Daci_5230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5230 
Symbol 
ID5750842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5794771 
End bp5795316 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content65% 
IMG OID641300355 
Productheat shock protein GrpE 
Protein accessionYP_001566244 
Protein GI160900662 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC AAAACTCCAA CCCCTTGCAA GACGCAGCCC CGGAAGAAAT CGAAGCCGCC 
ATGGCGGCCA ATGCAGCCGA CGAGCTGCAG CGCCTGCAGA CCGAGCTGGC CGAACTCAAG
GCCAAGAGCG CCGAGCTGGC CGACCAGTTC CTGCGCGCCA AGGCCGAGGC CGAGAATGTG
CGCCGCCGCG CGGAAGACGA AGTCTCCAAG GCGCGCAAAT TCGGCATCGA GAGCTTTGCC
GAAAGCCTGC TGCCTGTCTG CGACAGCCTG GATGCCGCCC TGGCCATTCA ACAGGCCACG
CCGGAACAGC TGCGCGAAGG CGCCGACGCC ACGCTGCGCC AGCTGACCTC GGCCCTTGAG
CGCAACAAGG TCGTGACCAT CAATCCGGCT GCCGGCGAGA AATTCGACCC CAACCTGCAC
CAGGCCATCA GCATGGTGCC TGCACAGCAG GAAGCCAACA CCGTGGTGTC GGTCCTGCAA
AAGGGCTACC TGATCGCCGA CCGCATCCTG CGCCCGGCCC TCGTGACCGT GGCCCAGCCC
CAGTAA
 
Protein sequence
MSEQNSNPLQ DAAPEEIEAA MAANAADELQ RLQTELAELK AKSAELADQF LRAKAEAENV 
RRRAEDEVSK ARKFGIESFA ESLLPVCDSL DAALAIQQAT PEQLREGADA TLRQLTSALE
RNKVVTINPA AGEKFDPNLH QAISMVPAQQ EANTVVSVLQ KGYLIADRIL RPALVTVAQP
Q