Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5188 |
Symbol | |
ID | 5750800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5752917 |
End bp | 5753537 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641300313 |
Product | type IV pilus modification protein PilV |
Protein accession | YP_001566202 |
Protein GI | 160900620 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA CAAGCACCCA CGCTCGGCAC GCCAAAGGCT TCACCCTGAT CGAAACCCTG GTTGCCACCG TCGTCACGGC CCTGGGTGTT CTGGGAATCC TGAGCCTGCA GATGCGCACC CTGGCCGACA CCCAAAGCGG CGTGCGCCGC GCTCAGGCCA TCCGGTTGAT CGAAGACTTC AGCGAGCGCA CCCACGCCAA CCCCAATTCT CTCGGGCAGA TGAGCAACTA CGAATCCGAT TGGGATCACA CCCCTGAATC CACCGCCGAC TGCAGCGCCA CACCATGCGA CCCGGAAACG CTGGCCAGCT ACAACCTCGC GCTGTGGAAG GCTTCCGTTC ATCAACTGCT GCCAAGCGGA GCCGCCAAGG TCTTCCCTGC AACAGACGAC ACCAGCAACG GACGCCACCT GGGCATCGTG ATCAGCTGGC GTGAAAACGA GAAATCCAGC AAAGCCGGCG ACAAAAAACC CCTCGGACTC CATAGCGATG GCACACACGG CGACGAAGCC ATGGCCTGCC CCACCGGCAG AGCCTGCCAC CTGCAATACA TAGCGCTCAG CGCTCGTTGC GCGCCATATC TTGCCAACAA CGCAGTCCAG TTCTTCTGCG CAAGCCCATG A
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Protein sequence | MRLTSTHARH AKGFTLIETL VATVVTALGV LGILSLQMRT LADTQSGVRR AQAIRLIEDF SERTHANPNS LGQMSNYESD WDHTPESTAD CSATPCDPET LASYNLALWK ASVHQLLPSG AAKVFPATDD TSNGRHLGIV ISWRENEKSS KAGDKKPLGL HSDGTHGDEA MACPTGRACH LQYIALSARC APYLANNAVQ FFCASP
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