Gene Daci_5172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5172 
Symbol 
ID5750783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5737884 
End bp5738393 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content61% 
IMG OID641300296 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_001566186 
Protein GI160900604 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.950727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGG TTGCTGCTAC CCCATTTTCG ATCAAAGATT TCCTCAAGAG CTTCATGCTC 
TGGGAACTGG CCAAGGGCAT GGCCCTGACT GGCCGCTACA CCTTCCGCCG CAAGGTCACG
GTGCAGTTCC CCGAGGAAAA GACACCCCTG TCGCCGCGTT TTCGCGGACT GCACGCCCTG
CGCCGTTATG ACAACGGCGA AGAGCGCTGC ATTGCCTGCA AGCTGTGCGA GGCGGTGTGC
CCGGCCATGG CCATCACCAT CGAGTCCGAT GTGCGTGACG ACGGCTCGCG CCGCACCACG
CGCTACGACA TCGACCTGAC CAAGTGCATC TTCTGCGGCT TCTGCGAGGA AAGCTGCCCG
GTGGACTCGA TCGTCGAGAC GCATATCTTC GAATACCACG GAGAAAAGCG CGGCGACCTG
TACTTCACCA AGGACATGCT GCTGGCCGTT GGCGATCGCT ACGAACCCGA GATTGCCGCC
GCCAAGGCTG CGGACGCCAA GTACCGCTGA
 
Protein sequence
MSAVAATPFS IKDFLKSFML WELAKGMALT GRYTFRRKVT VQFPEEKTPL SPRFRGLHAL 
RRYDNGEERC IACKLCEAVC PAMAITIESD VRDDGSRRTT RYDIDLTKCI FCGFCEESCP
VDSIVETHIF EYHGEKRGDL YFTKDMLLAV GDRYEPEIAA AKAADAKYR