Gene Daci_5125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5125 
Symbol 
ID5750736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5680010 
End bp5681065 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID641300249 
Productiron-sulfur cluster binding protein 
Protein accessionYP_001566139 
Protein GI160900557 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0783629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.843466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCT GGGCCCGCGA GCTGGGATTT TCCCAAATTG GCGTGGCCGG CGTGGATTTG 
TCTTCTGCGG AGCCGGGTTT GATGCAGTGG CTGGCCCAAG GGTTCCATGG CGAGATGGAC
TATATGCAGG CCCACGGCCT GCGCCGCGCC CGGCCTGCCG AGCTGGTGCC GGGCACGGTC
AGCGTGATCA CGGCGCGCAT GGACTACCTG CCGCGCGACA CGCCAGCCGA TGCGCCGGGC
GCCTGGCAAG CGGTGGAGTG GGCGCGGCTG CAGCGGCCCG ACGAGGGCAT TGTCTCCGTC
TATGCCCGGG GGCGCGACTA TCACAAGGTG CTGCGCAACC GGCTGCAGAA GCTGGCCGAG
CGCATTGCAC AGGAAGTCGG CCCCTTCGGG CACCGCGCCT TCACCGATTC CGCGCCCGTG
CTGGAGGCCG AGCTGGCCCG GCGCAGCGGC CAGGGCTGGC GCGGCAAGCA CACGCTGGTG
CTCAATCGCG AAGCGGGCTC CATGTTCTTC CTGGGCGAGA TCTATGTGGA CCTTGCGCTG
GAGCCCACGG CGCCGGTGAC CGCGCACTGC GGCAGCTGCG CGGCCTGCAT CACGGCCTGT
CCCACGGGCG CCATCGTGGC GCCGCACCGG GTGGACGCGC GGCGCTGCAT CTCCTATCTG
ACCATCGAGC ATGCGGGCGC CATTCCCGAG GAGCTGCGGC CGCTGATGGC CAACCGCATC
TATGGCTGCG ACGACTGCCA GCTGGCCTGT CCCTGGAACA AGTTCGCCCA GCCCAGCCGC
CTGCCCGACT TCGATGCGCG CGAGGCCCTG TCCGGCGGGC AGCTGGTGCA CTTCTTTGCC
TGGGACGAGC CGACCTTTCT GCGCCTGACC GAAGGCAGCC CCATCCGGCG CATAGGCCAT
GCGCGCTGGC TGCGCAATGT GGCCGTGGCG CTGGGCAATG CCTGGCGTGA AACCGGCAAC
GCGGCATTGC AGCAGGCGCT GGCCAGCCGC GCCGAACATC CGGACGCCCT GGTGCGCGAG
CACGTGGCCT GGGCGCTGTC GCAAAGATCG GATTGA
 
Protein sequence
MQGWARELGF SQIGVAGVDL SSAEPGLMQW LAQGFHGEMD YMQAHGLRRA RPAELVPGTV 
SVITARMDYL PRDTPADAPG AWQAVEWARL QRPDEGIVSV YARGRDYHKV LRNRLQKLAE
RIAQEVGPFG HRAFTDSAPV LEAELARRSG QGWRGKHTLV LNREAGSMFF LGEIYVDLAL
EPTAPVTAHC GSCAACITAC PTGAIVAPHR VDARRCISYL TIEHAGAIPE ELRPLMANRI
YGCDDCQLAC PWNKFAQPSR LPDFDAREAL SGGQLVHFFA WDEPTFLRLT EGSPIRRIGH
ARWLRNVAVA LGNAWRETGN AALQQALASR AEHPDALVRE HVAWALSQRS D