Gene Daci_5060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5060 
Symbol 
ID5750671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5606727 
End bp5607080 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content68% 
IMG OID641300184 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_001566074 
Protein GI160900492 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.236785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCA CCACCACCGC ATCCGGCCTG CAGTATGAAG ACACCGTCGT GGGCGACGGC 
GCCGAAGCCC AGCGCGGCCG CAGCGTGACC GTGCACTACA CGGGCTGGCT CTACAACAAC
GGCGTGCAGG GCGCCAAGTT CGACTCCAGC AAGGACCGCA ACGATCCCTT CGTCTTCCCC
CTGGGCGGCG GCATGGTGAT CAAGGGCTGG GACGAAGGCG TGCAAGGCAT GAAGGTGGGC
GGCCAGCGCA CCCTGATCAT CCCGGCCGAA CTGGGCTATG GCGCCCGCGG CGCCGGCGGC
GTGATCCCCC CCAACGCCAC GCTGAAGTTC GACGTGGAGC TGCTGGCCGT CTGA
 
Protein sequence
MAFTTTASGL QYEDTVVGDG AEAQRGRSVT VHYTGWLYNN GVQGAKFDSS KDRNDPFVFP 
LGGGMVIKGW DEGVQGMKVG GQRTLIIPAE LGYGARGAGG VIPPNATLKF DVELLAV