| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5052 |
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| Symbol | |
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| ID | 5750663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5597597 |
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| End bp | 5599777 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300176 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001566066 |
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| Protein GI | 160900484 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0923716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.422268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTATC GCGATCTGCG CGGAGTTCTT CCGTCGCGTC CTTCCCATCT GGCCCTTGTG
GTGGCTGCCG TCTGCGCTTC GGGTGCCGTC TGTGCACAGA CGGCAACAGG CAATGCCGTG
CCCGCCACGG AGCTGCGCGA AGTCGTGGTC TCCGCCTCGG GTTTCGAGCA GGACATCAAG
GAGGCGCCGG CCTCCATCAC CGTCATACCG CGTGAGGAAC TGGCCAAGGG CCGCTTCGGC
AGCCTGACCG ACGCGCTGGA AAGCGTGGAA GGCATCGACG TGGGCGCCCC CGCAGGCAAG
ACCGGCGGCC TGAACATCAG CATCCGCGGC ATGCCCAGCG ACTACACGCT GGTGCTCATC
GACGGCCGCC GCCAGAACTC GGCCGGCAAC GTCACGCCCA ACGGCTTTGG CGAGACGCAG
ACCAGCTTCA TGCCGCCCAT CGGCGCCATC GAGCGCATCG AGGTCATCCG CGGCCCCATG
TCCACGCTCT ACGGCTCCGA CGCCATGGGC GGCGTGATCA ACATCATCAC CCGCAAGGTC
GGCAAGACCT GGACGGGCAG CGTCAGCGCC GACTACACGC TGCAGGAAGA GTCGGAGTTC
GGCGACATCA AATCCGGCAA GTTCTACCTG AGCGGCCCCA TCAAGGAGGA CCTGCTGGGC
CTGTCGATCC GCGGCAGCAC GCAGCGCCGG GCCGCTTCGG ACATCACCTA TGCGGGCGCC
AACGGCCAGC CCGCCGTGGC CATCATGGGC GCCAATCCGG TCAAGTCCGA GATCAACAAC
CTGGGCCTTC GCCTGGCGCT CACGCCCAAC AGGTACCACG ACATCACGCT GGACCTGGAC
TCGGGCCGCC AGACCTATGA CAACTCGCGC GGCCAGCTCG GCACGCTGGG GCTGCAGGGC
GGCTACGGCC CCGAACAGAA ATACAACCGC GACCAGCTCA CGCTGGCGCA CACGGGCCGC
TTCGGCTTCG GAACCTGGGA CACCAGCTTC ATGGTCAACC GCACCGAAAC CATGGGCCGC
ACCATTCCCC CGGGAACGCC GGGCGCGACA CCGGGCGCTG CGCGCACGCT GGAGGTGGAA
AGCAAGGTGC TGGACAGCAA GCTGGTCCTG CCCTGGGGCG CCCACCTGAC CACGCTGGGC
GGCCAGTGGT GGGATGCCGA GATGAAGGAC GGCGTGGCGC CGAACAAGTT CGCCTTCACG
CAGAAGGCCC TGTTTGCCGA GGACGAATGG AGCCTGACCG ACGCCTTCAA GCTCACGCTG
GGCGCGCGCT ATGACCGCCA CAGCCTCTTC GGCGGCAAGC TCAGCCCGCG CATCTACGGC
GTGTGGAATG CCGCGCCGCA GTGGACCGTG AAGGGCGGCA TCAGCAACGG CTACAAGACG
CCGCGCGTGG AACAGCTGGC GCCCGGTATC AACGGCTTTG GCCAGCAGGG CCGCCTGCCG
CTGGTGGGCA GCCCCAACCT CAAACCCGAA ACCAGCCGCA CCACCGAACT GGGCGTCTAT
TTCGACAGCC CCACGGGCTT TGCAGGCAGC GCCACGGTGT TCAACAACGA GTTCAAGGAC
AAGATCACCA GCGGCCCGGG CCTGATCAAC TGCGACTTCG CGGCAGCGCC CAACCGGCCC
GGCTGCGTGA GCTTCGGCAA CTGGCCCCTG GTGGATGCCT TCGGCCAGTC CATCAACGTG
GACGAGGCCG TCACGCGCGG GCTGGAGCTG AGCGCGCGCA TGCCGCTGGG GCGCGGCTGG
AATGCCAGCG CGAACTACAC CTTCACCAAG AGCGAGCAAA AGAGCGGCCC CAACCGGGGC
AACCCGCTGA GCGACACGCC CAAGCATGCG CTCAACGCCC GCCTGAACTG GGAGCCGGGT
GCCCAGTGGA ACCTGTGGCT GCGTGCCGAA TACCGCAGCG AACGCTTCCG CGACCCCGGC
ACCAGCGCCA GCACCCAGGC CGCCAAGGCC GCGCTGGGCA ACTACAAGCC CTACACGCAG
TTCCACCTGG GTGGCAGCTA CCGCGTGAGC AAGCAGTTCA CCATCAACGC GGCCATCTAC
AACCTGTTCA ACAAGGGTTT CGTGGACTAC CAGCCCTACA ACGTACCGGG CCAGGTCCAG
GGAGCCCTGC TGTTTGGCAA CCGCTACGCG AACAGCCAGG AAGGCCGCCG CCTGTGGGTG
TCCGCCAACT ACGAGTTCTG A
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| Protein sequence | MSYRDLRGVL PSRPSHLALV VAAVCASGAV CAQTATGNAV PATELREVVV SASGFEQDIK
EAPASITVIP REELAKGRFG SLTDALESVE GIDVGAPAGK TGGLNISIRG MPSDYTLVLI
DGRRQNSAGN VTPNGFGETQ TSFMPPIGAI ERIEVIRGPM STLYGSDAMG GVINIITRKV
GKTWTGSVSA DYTLQEESEF GDIKSGKFYL SGPIKEDLLG LSIRGSTQRR AASDITYAGA
NGQPAVAIMG ANPVKSEINN LGLRLALTPN RYHDITLDLD SGRQTYDNSR GQLGTLGLQG
GYGPEQKYNR DQLTLAHTGR FGFGTWDTSF MVNRTETMGR TIPPGTPGAT PGAARTLEVE
SKVLDSKLVL PWGAHLTTLG GQWWDAEMKD GVAPNKFAFT QKALFAEDEW SLTDAFKLTL
GARYDRHSLF GGKLSPRIYG VWNAAPQWTV KGGISNGYKT PRVEQLAPGI NGFGQQGRLP
LVGSPNLKPE TSRTTELGVY FDSPTGFAGS ATVFNNEFKD KITSGPGLIN CDFAAAPNRP
GCVSFGNWPL VDAFGQSINV DEAVTRGLEL SARMPLGRGW NASANYTFTK SEQKSGPNRG
NPLSDTPKHA LNARLNWEPG AQWNLWLRAE YRSERFRDPG TSASTQAAKA ALGNYKPYTQ
FHLGGSYRVS KQFTINAAIY NLFNKGFVDY QPYNVPGQVQ GALLFGNRYA NSQEGRRLWV
SANYEF
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