Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5031 |
Symbol | |
ID | 5750642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5568411 |
End bp | 5570009 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641300155 |
Product | diguanylate cyclase |
Protein accession | YP_001566045 |
Protein GI | 160900463 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC GCTCCGCTTC CGAACTGGCA CGCGAAACCC TGCGGCAACT GGCGCTGAAC CGCCTGCCGC CCACACCGGA AAACTACACC CGCCTTTATG AACAGGCGGC TGGCGAGCCC GGCCCCGCCA GCTTTCCCCA GGGCCCGCTG CGCCACGTCC ACGCGCTGCT GCCTGCGCAG ACGCCGGGGC AAAAGCGCCT GCGCGACCAG CTGGGCGCCG CCATAGAGCG CAGCGACTGG CAAGGGCTGC AGCAGGTCAT CACCGCCTAT GCCAACGCGG CCCTGCAGCC GCCCGCCTAT GAGGCCAGGC CCGTGGAGCT GCCCGTGCCG CCGCCCGTCC AGGCCCTGCC CGACGACCTG ACCCAGCAGT TGGCGCGGCG CTTCGAGGCC TTGTCCACGC TGCTGGACAC CCAGGACACC AAAACCGGGC AACTGCACCA GCAGCTGATG GAGCAGCTGC AATCGCCGCC CGTGGATGCC AAGGCCCTGG CGCGGCGCCT GCACGACCAG CACTACCAGC TGTCGTTCGC CATCGCCGAC CAGCTTCAGG TCCTGCAGTT GATGCAGGAG TTGCTGCAGA CCCTGGTGCA GCACCTGGCC CAGGACCCCA CGCATGGCAG CTGGCTGGTG CAGCAGCTCA CGGCCATCGA GCAGGCCATC ACCCCGCCGC TGTCGCCCGC GCCTCTGGCC GATGCACGGC GCGAGCTGCA GACCGTGATC CACCGGCGCC TGCAGTTGCA GGACGGCATG GCCGCCGCGC AGCAGGCGCT CAGGGACATG CTGGGCGGCT TCGTCCAGCA CCTGGCGCAG ATCACGAGCA GCAACGAAAC GCTGGGCGCC CGCATGGAAG AGGCGGCACG CCAGCTGGAC GGCATCCAGC GCCTGGAAGA TGCAGCCCCG CTGCTGCAGC AGGTGCTGGA GGCCACGCGC ACCATGGCCG CCGGCAGCCG CGTGGCTCAG GAGGAGCTGC AGGCGCTGCG CGCCCATGTC GATGCCTGCG AGGCCCGCAT CGAAACACTG CAGCAGGAGC TGGACGAGGC CGCGCGCCGC GCACGCCACG ACCCGCTGAC CGGCCAGCTC AACCGCCTGG GCGTGAGCGA GGCACTGGAC CGCGAGGTGG CACGCGCACA GCGCCATGGC CAGCCGCTGA GCGTTGCCCT GGTCGATATG GACGGCATGC AGGCCCTCAA TGCCGAGCTG GGGCACGCCA TGGGCGATGC CGCGCTGGTG CATGTGGCCC AGCTGGCACG CCAAGGGCTG CGCCCGGAAG ACGTGGTGGG CCGCTATGAA GGCCAGGCCT TCGTGCTGCT GCTGCCGCAG ACCCCGGAGA CGGCGGGCGC CCAGGCGCTG CAGCGCCTTC TGCAGTTGCT GGAGCAGGCG CCTTTGCCCG CATCTGCGCA GACCCCAGGC CAGCCCGCAC CCCGGCCCCT GAGCTTCAGC GCGGGCGTGG CCCAGTTGCA AGGCCACGAA AACGGCATGG ACGTGCTGCG CCGCGCCGAC ACCGCCATGC TGCAGGCCAA GGAGCGGGGC AAGCACTGCA TTGCCACGGC ATCAGGCGCA CAATCGCAGC CAGTTGGAAA TGCAGGCGCC GGCCTTTGA
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Protein sequence | MAERSASELA RETLRQLALN RLPPTPENYT RLYEQAAGEP GPASFPQGPL RHVHALLPAQ TPGQKRLRDQ LGAAIERSDW QGLQQVITAY ANAALQPPAY EARPVELPVP PPVQALPDDL TQQLARRFEA LSTLLDTQDT KTGQLHQQLM EQLQSPPVDA KALARRLHDQ HYQLSFAIAD QLQVLQLMQE LLQTLVQHLA QDPTHGSWLV QQLTAIEQAI TPPLSPAPLA DARRELQTVI HRRLQLQDGM AAAQQALRDM LGGFVQHLAQ ITSSNETLGA RMEEAARQLD GIQRLEDAAP LLQQVLEATR TMAAGSRVAQ EELQALRAHV DACEARIETL QQELDEAARR ARHDPLTGQL NRLGVSEALD REVARAQRHG QPLSVALVDM DGMQALNAEL GHAMGDAALV HVAQLARQGL RPEDVVGRYE GQAFVLLLPQ TPETAGAQAL QRLLQLLEQA PLPASAQTPG QPAPRPLSFS AGVAQLQGHE NGMDVLRRAD TAMLQAKERG KHCIATASGA QSQPVGNAGA GL
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