| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5027 |
|---|
| Symbol | |
|---|
| ID | 5750638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5564792 |
|---|
| End bp | 5565670 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641300151 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001566041 |
|---|
| Protein GI | 160900459 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGTAT CGCGAAGTCT TGGGGCTTGG GGAACGGTGG TGCTGGCCGG CATGGTTCTG
GCAGGCTGCA CATCCCAAGT GAACAGGGCT CCCGTGGAGG ACCGTGGAAC GACCACCACC
TCCTCCACCT CTTCCTCGCC ATCGGCAGCC GTCAAGCCGC TGCCCGGCGT CGAAAACGCC
GGCAAGCCCG GCTACTACAC GATCAAGCCC GGTGACACGC TGATCCGCAT CGGCCTGGAA
ACCGGCCAGA GCTGGAAGGA CATCGCGCGC TGGAACAATC TGGAGAACCC CAACCTGATC
GAAGTCGGTC AGGTGGTGCG CGTCGTGCCG CCGACCAGCT CGGACAGCGT CGGCACGCGC
CCCTCGTCCA CTGCCTCCTC CACGCCCAGC GGCTCGCCCG TGGTGGCAAC GCCGCTGCCA
CCCGTGGCAT CGTCGGGCGG CTCCACGGCA ACGCCTGCAC CCGCACCGAC CCCGGCACCC
GCCCCTGCAC CCGCAGCCGG CAAGGGCGCC GACGATGTGG ACTTCATCTG GCCTGCATCG
GGCAGCCTGA TCGCCGGTTT TGACGAGGCG CGCAACAAGG GTTACGACAT CGCAGGCAAG
GCCGGCGATC CCGTGATGGC CGCTGCCGAT GGCCGCGTGG TCTATGCCGG CGCCGGCCTG
CGTGGCTATG GCAACCTGAT CATCCTCAAG CACAACAACA CCTACCTCAC GGCCTACGCG
CACAACCAGA CGCTGCTGGT CAAGGAAGAC CAGACCGTGC GCAAGGGCCA GAAGATCGCC
GAGATGGGCA GCACCGACGC GGACCGCGTG AAGCTGCACT TCGAGGTGCG TCGCCAGGGC
AAGCCTGTCG ATCCTTCGCG CTACCTGCCT TCGCGCTGA
|
|---|
| Protein sequence | MLVSRSLGAW GTVVLAGMVL AGCTSQVNRA PVEDRGTTTT SSTSSSPSAA VKPLPGVENA
GKPGYYTIKP GDTLIRIGLE TGQSWKDIAR WNNLENPNLI EVGQVVRVVP PTSSDSVGTR
PSSTASSTPS GSPVVATPLP PVASSGGSTA TPAPAPTPAP APAPAAGKGA DDVDFIWPAS
GSLIAGFDEA RNKGYDIAGK AGDPVMAAAD GRVVYAGAGL RGYGNLIILK HNNTYLTAYA
HNQTLLVKED QTVRKGQKIA EMGSTDADRV KLHFEVRRQG KPVDPSRYLP SR
|
|---|
| |