Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5007 |
Symbol | |
ID | 5750618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5542857 |
End bp | 5544089 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300131 |
Product | YVTN beta-propeller repeat-containing protein |
Protein accession | YP_001566021 |
Protein GI | 160900439 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGA GCGTCCGAGG GGCTGATTGG CGCAGCTACA CTGCGCAGAT TCTCAGAAGG TGGTGCTTTG TGAAACGTCT TTCCGTCGGG CGCTTGAGCG CGGCTGTGGC TTTGGTTGTG GGCGGCGGTG CGCTGGCCTG GCTGGCTGTG GCATCCCTGC CCGGATCCAA ATCGGCCCGC GCGGCCTCGG CCACGTCTGC TGCCGTGCAG GCGCAAGCCG CATCGGCCCA GGCGGCCGCC GTTCCTGCCG CGCCTTCCGT TCCCTCGGCT ACGGCAGCTC CCGCGGCCCC GGTCGCGCGT GTCACGCCGC CACCGCAGAC CCAGGGCCCC ACGCCCATCT TTGTGCTCAA CTCGCTTGAT GCCAACATCA GCATCGTGGA CCCGGTCACC TGGCAGGAGA CGGCACGCAT TCCCACGGGC AAGGAGCCGC ATCACCTGTA CCTCACGCCG GACGAGAAAT CGCTGGTCGT GGCCAATGCG CTGGGCGACA CCCTGACCCT GGTCGATCCG CGCACGGGCG AGGTGCAGCG CGTGATCCGC GACATCATCG ACCCCTATCA CCTGCGCTTC AGCCCGGACA TGAAGTGGTT CGTCACGGCG GCCAACCGCC TCAACCACAT CGACATCTAC CGCTGGGATG GCCAGAACCC GCAGCTGGTC AAGCGCGTGC CCACGGGCAA GACGCCCAGC CATCTCTGGA TCGATGCCAA GAGCACGACC ATCTATTCCA CCATGCAGGA CAGCGATGCC CTGGTGGCCA TCGACATCGC CACCCAGACC ATCAAGGCCC GCGTGCCCAC CGGCCCCATG CCGGCCGATC TCTATGGCAG CCCGGACGGC ACCAAGCTGT TCATCGGCCT GACCGGCAGC GATGGCGTGG AAGTGTTCGA CATCACCGGC CCCGAGCCGC GCAGCGTGGC CCGCATCAAG ACAGCCGCTG GCGCCCACGC CATGCGCGCC GCCGGCGACG GCCGCCACCT GTATGTGAGC AACCGCGTGG CCAACACCAT CAGCAAGATC GACATGCAGA CCAACCAGGT CGTGGCCAAC TACCCGGCAC CGGGCGGCCC GGACTGCATG GACGTCTCCG CCGACGGCCG CTACCTGCTG GTCAGCTCGC GCTGGGCGCG CAAGCTGTCG GTGATCGACA CCGTGGAAAA GAAGGTGGTC CAGCAGGTCA AGGTCGGCAA GTCGCCGCAC GGCGTGTGGA CGCTGGCCCA CGCGCAACGC TGA
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Protein sequence | MPQSVRGADW RSYTAQILRR WCFVKRLSVG RLSAAVALVV GGGALAWLAV ASLPGSKSAR AASATSAAVQ AQAASAQAAA VPAAPSVPSA TAAPAAPVAR VTPPPQTQGP TPIFVLNSLD ANISIVDPVT WQETARIPTG KEPHHLYLTP DEKSLVVANA LGDTLTLVDP RTGEVQRVIR DIIDPYHLRF SPDMKWFVTA ANRLNHIDIY RWDGQNPQLV KRVPTGKTPS HLWIDAKSTT IYSTMQDSDA LVAIDIATQT IKARVPTGPM PADLYGSPDG TKLFIGLTGS DGVEVFDITG PEPRSVARIK TAAGAHAMRA AGDGRHLYVS NRVANTISKI DMQTNQVVAN YPAPGGPDCM DVSADGRYLL VSSRWARKLS VIDTVEKKVV QQVKVGKSPH GVWTLAHAQR
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