Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4957 |
Symbol | |
ID | 5750568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5487369 |
End bp | 5488538 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300081 |
Product | chorismate synthase |
Protein accession | YP_001565971 |
Protein GI | 160900389 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCCT GCGCAATGCA CCGCCGCCGC GGGCACGGCG CTTGCGGGCT ACCCGGGCAT AATCGTCGGC CTATGAGCGG CAACACCTTC GGCACCCTAT TCACTGTCAC CAACTTCGGC GAATCGCATG GCCCGGCCAT AGGCTGCGTC ATCGACGGCT GTCCGCCCGG CATGGCGCTG AACGAAGCGG ATATCCAGCA AGAACTGGAT CGCCGCCGTC CCGGCACCAG CAAGTTCGTG ACCCAGCGCA ACGAGCCCGA TTCGGTGGAA ATCCTCTCGG GCGTCTACGA AGGCCGCACC ACGGGCACGC CGATCGCGCT GCTGATCCGC AATACCGACC AGCGCAGCAA GGACTACTCC AACATTGCGC AGAGCTTTCG TCCCGGCCAT GCCGACTACG CCTACTTCCA GAAATACGGC ATCCGTGATC CGCGCGGCGG CGGCCGTTCC TCGGCACGGC TGACGGCCCC CACGGTGGCC GCTGGTGCCG TGGCCAGGAA GTGGCTCAAG GAAAAGTTCG GCACCGAGTT CCGCGCCTGC ATGACCCAGG TGGGCGAGCT GTCGCTGCCC TTCGAGAGCT GGGAGCATGT GCGCAACAAC CCCTTCTTTG CGCCGGTGGC CGATGTGTCT CAATACGAGG AATACATGGA TGCGCTGCGC AAGTCGGGCG ACTCCTGCGG CGCGGCGCTG CGCGTGCAGG CCAGCGGCAT GCCGGTGGGC CTGGGCCAGC CGCTGTATGA CCGCCTGGAT GCCGACGTCG CCTACGCCAT GATGGGCCTG AATGCGGTCA AGGCTGTGGA GATCGGTGCC GGTTTCGAAA GCGTGGTCCA GCGCGGCACC ACGCACGGCG ACTCGCTGAG TCCCGAAGGC TTTCGCAGCA ACAACGCCGG TGGCATCGTC GGCGGCATCA GCACGGGCCA GGACCTGGAA GTGCGCATAG GCATCAAGCC CACCAGTTCC ATCATCACGC CGCGCGAATC CATCGACGTG CAGGGCCAGA GCACCGAGGT CATCACCAAG GGCCGCCACG ACCCCTGCGT CGGCATCCGC GCAGCGCCCA TCGCCGAGGC GCTGCTGGCC CTGGTGGTGA TGGACCATGC GCTGCGCCAC CGCGCCCAGT GCGGTGACGT GGATTCGGGC CTGGCTCCCA TCCCTGCCGC CGCGCCCTGA
|
Protein sequence | MAACAMHRRR GHGACGLPGH NRRPMSGNTF GTLFTVTNFG ESHGPAIGCV IDGCPPGMAL NEADIQQELD RRRPGTSKFV TQRNEPDSVE ILSGVYEGRT TGTPIALLIR NTDQRSKDYS NIAQSFRPGH ADYAYFQKYG IRDPRGGGRS SARLTAPTVA AGAVARKWLK EKFGTEFRAC MTQVGELSLP FESWEHVRNN PFFAPVADVS QYEEYMDALR KSGDSCGAAL RVQASGMPVG LGQPLYDRLD ADVAYAMMGL NAVKAVEIGA GFESVVQRGT THGDSLSPEG FRSNNAGGIV GGISTGQDLE VRIGIKPTSS IITPRESIDV QGQSTEVITK GRHDPCVGIR AAPIAEALLA LVVMDHALRH RAQCGDVDSG LAPIPAAAP
|
| |