| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4940 |
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| Symbol | |
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| ID | 5750547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5460344 |
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| End bp | 5462641 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641300060 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_001565954 |
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| Protein GI | 160900372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.269346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0745121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAC GTATCAATCG CCTGGGCGTG CGCGCTGCAT CGACCCTGGC TGCCATGGTT
TTGGCTGCCA ATGCAGCCTG GGCGCTGGAG CCCTTCCGGG TACAGGACAT CCGCATCGAA
GGCCTGCAGC GCGTGGAGCC GGGCACGGTC TTCGCATCCA TCCCGCTGCG CGTGGGCGAC
CAGTATGACG ATGACAAGGG CGCAGCTGCG ATCCGCTCGC TGTTCGCGCT GGGATTGTTC
AAGGACATCC GCCTCGAAGC CAATGGCAAC GTGCTCGTTG TCGTCGTCGA AGAACGACCG
ACCATCGCCG AGGTGAACTT CGCCGGCACC AAGGAGTTCG ACAAGGAAAC CCTGCAAAAG
GCCATGCGCG ATGTGGGCCT GGCAGAAGGT CGTCCCTTCG ACAAGGCCCT GGCCGACCGT
GCCGAGCAGG AACTCAAGCG CCAGTACATC AACCGCAGCC TTTATGGCGC GGAGGTCGTC
ACCACGGTCA CGCCCATCGA GCGCAACCGC GTCAACCTGA CCTTCACGGT GACCGAGGGC
GATCCGGCCC GCATCAACGA GATCCACATC GTCGGCAACA AGGCCTTCAG CGAATCCACG
CTCAAGGACC TGTTCGATCA GGATACCGGC AACTGGATGA GCTGGTACAC CAAGTCGGAC
CGCTATGCGC GCAACAAGCT CAACGCCGAC CTGGAAACGC TGCGCTCGTA CTACCTGCAG
CGTGGCTACC TGGAGTTCCG CGTGGACTCC ACCCAGGTGG CCATCTCGCC CGACAAGCAG
ACCATCTCGC TGACCCTGAA CATCCATGAA GGCGAGCGTT TCGTCGTCTC CGGCGTCAAG
CTGGAGGGCA ACTACCTCGA CCGCGACGAC GAGTTCAAGT CCCTGGTCAA GATCAAGCCG
GGCGAGCCCT ACAACGCCGA CCAGGTCACG GCGACGACCA AGGCCTTCAC CGAGTACTTC
GGCAACTTCG GCTTTGCCTT TGCACGCGTC GAGGCCGTGC CGGACATCGA CCGTGCGACC
AACCGCGTGG CCTTGGTACT GCATGCCGAG CCGTCGCGCC GCGCCTATGT GCGCCGTATC
AACGTCAGCG GCAACAATCG CACGCGTGAC GAAGTGATCC GCCGCGAATT CCGCCAGTAC
GAAGCTTCCT GGTATGACGG CGACAAGATC CGCCTGTCGC GCGACCGCGT GGACCGCCTG
GGCTTTTTCA CCGAAGTCAA TGTCGAGACC CAGGAAGTGG CGGGCTCGCC CGACCAGGTG
GATCTGGTCA TCTCGGTGGC TGAAAAGCCC ACGGGTTCGC TGCAACTGGG TGCCGGCTTC
TCCAGTGCCG AAAAGGTTTC GCTGTCGTTC GGCATCAAGC AGGAAAACGT GTTCGGCTCG
GGCAACTACC TGGGCGTGGA CGTGAACACC AGCAAGTACC GCCGCACCAT GGTGCTGTCC
ACCACGGACC CGTACTTCAC CGACACCGGC ATTTCGCGCA CCTACGATCT GTACTACCGC
ACCGACCGTC CCTACTACGA CGATGCGGCC TACAAGATCG TCACCTCGGG CGGCAGCGTT
CGCTTTGGCG TGCCGTTCAG CGAGATTGAC ACTGTGTATT TCGGCGGTGG CGTGGAGCGC
TCGGAAATCA AGCCCGGCAC CTACCTGCCC CAGGCTTACA AGGACTATGC CGACAAGTAC
GGCTATGCCA ACACCGGCAT TCCGCTGACT CTGGGCTGGT CGCGTGACAG CCGTGACAGC
GCGCTGGCGC CCAACTCGGG TCTCTACCAG CGCCTGAACA CCGAGTGGTC GGTGGGTGGC
GAGGCCCGCT ATGTGCGAGC CAACTACCAG ATTCAGCAGT ACATCCCGCT GAGCAAGAAG
TACACGCTGG CCTTGAACGG TGAACTCGGT TATGGCAAGG GCCTCAATGG CCGTCCGTTC
CCATTGTTCA AGAACTTCTT CTCGGGTGGT CTGGGCTCGG TGCGTGGCTT CGAGCAGGGC
TCGCTGGGTC CGCGCGACTC TGCAGAGAAC ATTGCCCTGG GCGGCTCCAA GAAGGTGACT
TTGAACGCCG AGTTCATGGT TCCGTTCCCC GGAGCCGGCA ATGACAGGAC TTTGCGTCTT
TTTACATTCC TCGATGTGGG TAATGTCTAC GGCGCCAACC AGAACTTCGA TCTCGGGGAG
CTGCGGGCTT CCACGGGCCT TGGCATCAGC TGGATTTCCC CGCTGGGCCC CCTGCGTCTC
GCCTTTGCTC AACCCATCCG CAAGCAGACC GGGGATAAAA TCCAGCGACT GCAATTCCAA
ATCGGAACCT CTTTCTAA
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| Protein sequence | MTKRINRLGV RAASTLAAMV LAANAAWALE PFRVQDIRIE GLQRVEPGTV FASIPLRVGD
QYDDDKGAAA IRSLFALGLF KDIRLEANGN VLVVVVEERP TIAEVNFAGT KEFDKETLQK
AMRDVGLAEG RPFDKALADR AEQELKRQYI NRSLYGAEVV TTVTPIERNR VNLTFTVTEG
DPARINEIHI VGNKAFSEST LKDLFDQDTG NWMSWYTKSD RYARNKLNAD LETLRSYYLQ
RGYLEFRVDS TQVAISPDKQ TISLTLNIHE GERFVVSGVK LEGNYLDRDD EFKSLVKIKP
GEPYNADQVT ATTKAFTEYF GNFGFAFARV EAVPDIDRAT NRVALVLHAE PSRRAYVRRI
NVSGNNRTRD EVIRREFRQY EASWYDGDKI RLSRDRVDRL GFFTEVNVET QEVAGSPDQV
DLVISVAEKP TGSLQLGAGF SSAEKVSLSF GIKQENVFGS GNYLGVDVNT SKYRRTMVLS
TTDPYFTDTG ISRTYDLYYR TDRPYYDDAA YKIVTSGGSV RFGVPFSEID TVYFGGGVER
SEIKPGTYLP QAYKDYADKY GYANTGIPLT LGWSRDSRDS ALAPNSGLYQ RLNTEWSVGG
EARYVRANYQ IQQYIPLSKK YTLALNGELG YGKGLNGRPF PLFKNFFSGG LGSVRGFEQG
SLGPRDSAEN IALGGSKKVT LNAEFMVPFP GAGNDRTLRL FTFLDVGNVY GANQNFDLGE
LRASTGLGIS WISPLGPLRL AFAQPIRKQT GDKIQRLQFQ IGTSF
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