Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4938 |
Symbol | lpxD |
ID | 5750545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5458804 |
End bp | 5459811 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641300058 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001565952 |
Protein GI | 160900370 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0964903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0759463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGTAT TGTTGGGTCA GATCCTCGAT GCACTCGGTG GCGAACTGGT CGGTGGCGAC AGGGAGATGC CCATCTCCCG CATCGCGCCG CTGGATTCCG CCGGGGCCGG GGATCTCAGT TTTCTGAGCA ACCCCCGCTA CCGCCAGCAA CTGGCCGCCT CCGAGGCGGC CTGCGTTATT GTGGCGCCCG CCATGCGTGA GCTGGCGCAG CAGCGGGGTG CCTGCATCGT GGTCCCTGAC CCGTATGCCT ACTTCGCCAG GGCCACGCAG TGGTGGAAGC GGAACTGCAG GTCTGTGGCG CCGGCCGGTA TTCATCCAAG CGCGGTGGTG CATGAGAGTG CCATCGTTGA TGCCTCTGCC ACGATCGGCC CGCTCTGCGT GGTTGAAGAG GGTGCCACCA TCGGTGCCCA CACCGTGCTG AAGTCGCGCG TCACTATTGG CGAGAACTGC CATGTGGGGG CGCGCTGTCT GCTGCATTCC GGCGTGGTGC TGGGAGCGGA CGGCTTCGGG TTTGCTCCCG AGAACGGAGC ATGGGTGAAG ATCGAGCAGC TCGGTGGCGT GCGGATCGGC GACGATGTGG AAATCGGCGC CAATACCTGC ATAGACCGCG GAGCGCTGGA CGACACGGTG ATCGAGGACG GGGTCAAGCT CGACAACCTG ATCCAGATCG GTCACAACGT GCACGTCGGC AAGCATACGG CCATGGCCGG TTGCGTGGGG GTGGCCGGCA GCGCGCGCAT TGGCGCGCAT TGCACCGTGG GAGGCGGCGC CATCGTGCTG GGCCATCTGC AGCTGGCCGA CAGGGTGCAT ATTTCGGCAG CGACGGTAGT GACCCGTTCG CTGACACAAT CAGGTGTTTA CACGGGCATG TTTCCCGTGG ATGAAAACGC CAAATGGGAA AAAAATGCTG CGACGCTGAA GCAGCTGCAC TCCATGCGCG ATCGCATCAA GGCCCTGGAG CGGCAACTGC AGCAATCGGC GGATCAAGGC CATAACGGAA CGCAATGA
|
Protein sequence | MSVLLGQILD ALGGELVGGD REMPISRIAP LDSAGAGDLS FLSNPRYRQQ LAASEAACVI VAPAMRELAQ QRGACIVVPD PYAYFARATQ WWKRNCRSVA PAGIHPSAVV HESAIVDASA TIGPLCVVEE GATIGAHTVL KSRVTIGENC HVGARCLLHS GVVLGADGFG FAPENGAWVK IEQLGGVRIG DDVEIGANTC IDRGALDDTV IEDGVKLDNL IQIGHNVHVG KHTAMAGCVG VAGSARIGAH CTVGGGAIVL GHLQLADRVH ISAATVVTRS LTQSGVYTGM FPVDENAKWE KNAATLKQLH SMRDRIKALE RQLQQSADQG HNGTQ
|
| |