Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4933 |
Symbol | |
ID | 5750540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5454826 |
End bp | 5455617 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300053 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001565947 |
Protein GI | 160900365 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.880579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.233006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAC AACCCGCCGC CACATTGATC CAGTCCCGTG ACAACGTCCT GGTCAAGGAT TTGCGCAGGC TTGTCCAGGA TAGTGGGGCC TACCGCAAGC AAGGGCGCGT CTGGCTGGAG GGGGACCATC TGTGCCGTGC CGCGCTGGCG CGTGGCATGC AGCCCTCCGT GGCCGTGGTG GCCGAATCCT TCTGGCCGCT GGTGCCGCTG GAATGGGTGC AGGGCGCAGG CAAGTGCGTG GTGCTGGCAG ATGCCCTGTT TGCCGAAGTC AGCGGCCTGG AGTCCCCGGC GCGCATCGGT TTTCTGATGG ACTGGCAGGC ATCGGCGGTC ATTCGTGCCG GCGTGGCCAC GGTGGTGTTG GACCGCGTGC AGGACGCAGG CAACGTGGGC TCCATCCTGC GCAGTGCCGC TGCCTTCGGT TTCAGCCAGG TCGTGGCCCT GAAGGGCACG GCTGCGCTGT GGAGCCAGAA GGTGCTGCGC GCCGGCATGG GGGCGCATTT CGGTCTGCAA CTGGTCGAGT CGGCCTCGTC CGAAGACCTG GATGCGCTTG GCTTGCCCCT GATCGTGACC AGTTCCCACC AGGGCGAACT GATCCACAAT GCCGCGCTGC CCTGGCCTTG TGCCTGGGCC ATGGGCCATG AAGGGCAGGG CGTTGGAGAG GCGCTGATGC AGCGGGCAGC GCAGCATGTG CGCATCGGCC AGCCGGGCGG TGAGGAGTCG CTGAACGTGG CTGCTGCAGC GGCGATATGC CTGCACGCAA GCAGCGTGAG TGCCGGCTCA CGTCAAGGGT AA
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Protein sequence | MSRQPAATLI QSRDNVLVKD LRRLVQDSGA YRKQGRVWLE GDHLCRAALA RGMQPSVAVV AESFWPLVPL EWVQGAGKCV VLADALFAEV SGLESPARIG FLMDWQASAV IRAGVATVVL DRVQDAGNVG SILRSAAAFG FSQVVALKGT AALWSQKVLR AGMGAHFGLQ LVESASSEDL DALGLPLIVT SSHQGELIHN AALPWPCAWA MGHEGQGVGE ALMQRAAQHV RIGQPGGEES LNVAAAAAIC LHASSVSAGS RQG
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