Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4932 |
Symbol | |
ID | 5750539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5453479 |
End bp | 5454645 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641300052 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_001565946 |
Protein GI | 160900364 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.259128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTCTCA AGGGAGCATT CCCATCCGCC ATCCTGGCGC TCGCAGACGG CACGGTCTTT GTTGGCAACT CGATCGGTGC GCAAGGCACC ACGGTTGGTG AAGTCGTTTT CAACACGGCA ATCACCGGCT ACCAGGAAAT CCTCACCGAC CCCAGCTACT GCCAGCAGAT CGTGACGCTC ACGTATCCGC ACATCGGCAA CTACGGCGTC AACGCAGAGG ATGTCGAGGC TGGCAAGGTC CATGCGGCGG GCCTGATCAT CAAGAACCTT CCGCTGCTGG CCAGCAACTT CCGCAAGTCC GAGACCCTGC CCGACTACCT CACGCGCAGC GGCACGGTGG CGATTGCCAA CATCGACACG CGTAAGCTCA CACGGCTGCT GCGCGACAAG GGCGCACAAA ACGGCGCCAT CGTCGGTTTG GCCGCTGGCG AAGAAGTGAC CCAGGCGCGC ATCGACGAGG CACTGGCTGC GGCCAAGGCG GCCCCCAGCA TGAAGGGCCT GGATCTGGCC CAGGTGGTGA GCGCCGCCCA GCAGTACGAA TGGACGGAAA CCGAGTGGAA GCTGGGCGAA GGCTACGGCC AGCAGCAGGC CCCGCGTTTC CATGTGGTGG CCTATGACTT CGGCGTGAAG TTCAACATCC TGCGCATGCT GGCCGAGCGC GGCTGCAAGC TGACCGTGGT GCCGGCCAAG ACGCCCGCCA AGGATGTGCT GGCACTCAAC CCCGACGGCG TTTTCCTGTC CAACGGCCCT GGCGACCCGG AGCCCTGCGA CTACGCCATT GCCGCCACCA AGGAACTGGT GGAGTCCGGC AAGCCCGTCT TCGGCATCTG CCTGGGTCAC CAGATCATGG CCCTGGCCGC CGGTGCCAAG ACCTTCAAGA TGGCCAACAG CCACCACGGC GCCAACCACC CCGTCAAGGA CCTGGACAAC GGCCGGGTCA GCATCACCAG CCAGAACCAC GGTTTTGCCG TGGAGATGGA GTCTCTGCCC GACACGCTGC GCGCCACGCA CATCAGCCTG TTCGACGGCA CGCTGCAAGG CCTTGAGCAC AAGGACAAGC CTGCGTTCTG CTTCCAGGGC CACCCCGAGG CTTCGCCCGG CCCGCACGAT ATCGCCTACC TGTTTGACCG CTTCACGGCG CTGATGGAGA AACACAAAAA TGCCTAA
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Protein sequence | MSLKGAFPSA ILALADGTVF VGNSIGAQGT TVGEVVFNTA ITGYQEILTD PSYCQQIVTL TYPHIGNYGV NAEDVEAGKV HAAGLIIKNL PLLASNFRKS ETLPDYLTRS GTVAIANIDT RKLTRLLRDK GAQNGAIVGL AAGEEVTQAR IDEALAAAKA APSMKGLDLA QVVSAAQQYE WTETEWKLGE GYGQQQAPRF HVVAYDFGVK FNILRMLAER GCKLTVVPAK TPAKDVLALN PDGVFLSNGP GDPEPCDYAI AATKELVESG KPVFGICLGH QIMALAAGAK TFKMANSHHG ANHPVKDLDN GRVSITSQNH GFAVEMESLP DTLRATHISL FDGTLQGLEH KDKPAFCFQG HPEASPGPHD IAYLFDRFTA LMEKHKNA
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