Gene Daci_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4900 
Symbol 
ID5750506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5414233 
End bp5414664 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content67% 
IMG OID641300019 
Productmembrane protein-like protein 
Protein accessionYP_001565914 
Protein GI160900332 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCT CTGTCATCCT GCCGCCCGGC GGCTTCTCCA TAGCGCATTG GTGCCTGCTG 
GTGGCGGCCC TGCTGCCGCT GGCCTGCGCC TACATCGCCA AGGCGCCCGG CATGAAGCAC
CGGCCGGGGC AGCGCGGTTT CGACAACCAC GAACCCCGGG CCTGGCTGGC GCAGCAGACG
GGCTACCAGG CACGGGCCAA CGCGGCGCAG GCCAATAGCT TCGAGTGCCT GCCGTTCTTC
ATTGGCGCCT TGCTGGTTGC CTGGCAATTG GGTGCACCGT CCGCGCGTGT CGATGGCCTG
GCCGTGGCCT TTGTTGTGTT GCGCATTGCC TACATCGCCT TCTATGTGAC GGACCGCGCC
ACGCTGCGCA GTCTGGCCTG GGCGCTGGCG CTGGTGGTGA ATCTGCTGCT GTTTTTCGCG
GGCTACCGCT GA
 
Protein sequence
MPTSVILPPG GFSIAHWCLL VAALLPLACA YIAKAPGMKH RPGQRGFDNH EPRAWLAQQT 
GYQARANAAQ ANSFECLPFF IGALLVAWQL GAPSARVDGL AVAFVVLRIA YIAFYVTDRA
TLRSLAWALA LVVNLLLFFA GYR