Gene Daci_4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4883 
Symbol 
ID5750489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5397420 
End bp5398094 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID641300002 
Producthypothetical protein 
Protein accessionYP_001565897 
Protein GI160900315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.866991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA ATCGCGGGAT GCCCGGCGCC AGCCGGCAGC CCGCGACAGA AAGAACAGCT 
TCCCCCATGC CCTTGTCCCC CATTCCCGAC CGCACGCCCC AGCATGAACG CGACGTGCGC
TACCGCAGCT ACGCCCGCGC CGACGGCCTC TGGGATATCG AAGGCGAGCT GCGCGACAGC
AAGACCCATG ACATCGAACT GAGCGGCGGC CGCCACATGC CCGCCGGCAC GGCCATACAC
CACATGTGGA TACGCACCAC GGTCGATGCG CGCCTGGTGG TGCAGGCCAT CGAGGTCGTC
ATGGACTCCC ATCCGCTGGG CCACTGCCCC GAAGCCACGC GGGCCCTGCA AAAAATGGTC
GGCTGCAGCA TGGCGCGCGG CTGGCGCAAG GCCATCAACG AGAACCTGGG CGGCGTGGCC
AGCTGCACGC ATCTGCGCGA GCTGCTGTTC AACATGGCCA CGGCCGCCTT CCAGTCCGTG
CCGGGCGTCT TTGGCGATGC CGACCCCAGC CAGCCGCCAC GCCACCTGGG CCAGTGCCTG
GGCTGGGACT TCAACGGCCC CGGCGTGGCC CGCTATTACC CGCAATTCGT GGGCTGGCAG
CCCGGCACAG GCGGCGCGAC CCCGATCCCG GCGTCCACAG CAACCACAGC AACTACCGAA
ACCCAAGGGG CCTGA
 
Protein sequence
MTENRGMPGA SRQPATERTA SPMPLSPIPD RTPQHERDVR YRSYARADGL WDIEGELRDS 
KTHDIELSGG RHMPAGTAIH HMWIRTTVDA RLVVQAIEVV MDSHPLGHCP EATRALQKMV
GCSMARGWRK AINENLGGVA SCTHLRELLF NMATAAFQSV PGVFGDADPS QPPRHLGQCL
GWDFNGPGVA RYYPQFVGWQ PGTGGATPIP ASTATTATTE TQGA