Gene Daci_4856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4856 
Symbol 
ID5750459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5368559 
End bp5369116 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content70% 
IMG OID641299972 
Producthypothetical protein 
Protein accessionYP_001565870 
Protein GI160900288 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.715473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAG CGCGCTGGCA CAATCGCAGC ATGCCCAGCA CCGCCAGAGA GTCATCCACC 
GCGTCCCCAG AGGACCGTGA GGCAGGCGCG CAGCAAATAC CCACGGCACA GACCCTGGAG
CCCGAGGCCA CTGCGCAGGC AGGCACGGCG CCGGCCTTCC ATGATGACGA TCCCCCTCCC
CTGCACCGCA TGCCGGCCGC CCCGTTGCGC TGGGCGCTGC AGCTGTTTGC CTGCCTGAGC
CTGGCCACGG GCATTGCCGG CATCTTCATT CCAGGATTGC CCACCACGGT GTTCGTGCTC
ATGGCCGGCT GGGCCGCGGC GCGCAGCTCG CAGCGCATGC ACACCTGGCT GTGGCGCCAT
CGCCTGTTCG GCCCCATGCT GCGCAACTGG GCACGGGGCG GCTGCGTGAG CCGGCGCGCC
AAATGGAGCG CCAGCGCCAT GATGAGCCTG TGCGCCGTCA TACTGCTGTG GACACGCCCG
CCCGCCTGGG TGCAGGCCGT GGCGCTGACC TCCATGGGCT GCGTGCTGGT GTGGCTGTGG
TTCAGGCCCG AGCCGTGA
 
Protein sequence
MATARWHNRS MPSTARESST ASPEDREAGA QQIPTAQTLE PEATAQAGTA PAFHDDDPPP 
LHRMPAAPLR WALQLFACLS LATGIAGIFI PGLPTTVFVL MAGWAAARSS QRMHTWLWRH
RLFGPMLRNW ARGGCVSRRA KWSASAMMSL CAVILLWTRP PAWVQAVALT SMGCVLVWLW
FRPEP