Gene Daci_4844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4844 
Symbol 
ID5750447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5347370 
End bp5348602 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content69% 
IMG OID641299960 
ProductVWA containing CoxE family protein 
Protein accessionYP_001565858 
Protein GI160900276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CTGCCACCGT GAACGATGCA TCCCTTGCCG GCGCCGACCC GCAGGAGACC 
GCCCCCCAGC CCACCACCCG CCTGCAACGC TGGCGCCTGG TGCTGGGCCA GCCGTCCGAG
GCCAGCTGCG GCGGGCTGGG CCCCAAGGGC AGCTCCATCG ACGAGATGGA CAAGGCCCTG
GCCGCGCTCT ACGAAGAGGA CAACAAGGAC GGTGGCCTCT CGCGCCGCGG CGGGCGGGGC
AACTCCTCGC CCAGCGTGGC GCGCTGGCTG GGCGACATCC GCAAGTACTT TCCCAGCCAG
GTCGTGCAGG TCATGCAGCG CGACGCCATG GAGCGCCTGA ACCTGCGCGA ACTCATGCTC
CAGCCCGAAA TGCTGGAGCA TGTGCAGCCC GACGTGCACA TGGTGGCCGA CCTCATCTCC
CTGGGCTCCG TCATCCCGCA GAACACCAAG GAGACCGCGC GCATCGTCGT GCGCAAGGTG
GTGGATGACC TCATGCGCCG CCTGGAAGAG CCCATGCGCA GCGCCGTCTC GGGCGCGCTG
GACCGCAGCC AGCGCAACCG CCGCCCGCGC CACTCCGAGA TCGACTGGAA CCGCACCATC
CGCGCCAACC TGCGCCACTG GCAGCCCGAC TACCGCACCA TCGTGCCCGA GACCCTGGTC
GGCTACGGCC GCAAGGTCCG CCGCCCGCAG CGCGAAGTCA TTCTGTGCAT AGACCAGAGC
GGCTCCATGG CCAACTCCGT CGTCTACTCC AGCATCTTCG GAGCCGTCAT GGCCAGCCTG
CCGGCCGTCG CTACCCGTCT GGTGGTCTTC GACACGGCGG TGGTGGACCT GACCGACAAG
CTCTCCGACC CGGTGGACGT GCTCTTTGGC GTGCAGCTGG GCGGCGGCAC CGACATCAAC
CGTGCCGTGG GCTACTGCCA GGGCCTGATC AGCGAGCCGC GCAACGCCAT CGTCGTGCTC
ATCTCCGACC TCTATGAAGG CGGTGTGGAA AGCGGCCTGC TGCGCCGCGC CTCCGAACTG
GTGGAGTCGG GCGTGCAGTT CATCACCCTG CTGGCACTCA GCGACGAAGG CGCCCCCGCC
TACGACGCGC AACTGGCCGC CAAGCTGGCC GCGCTGGGCG TGCCCTCGTT CGCCTGCACG
CCGGATGCCT TCCCGCAGCT CATGGCAGCC GCCATCCGCC GCGACGACGT GGCTGCCTGG
GCGGCAGGGC AGGGCTTCAA GACCAGCAAG TGA
 
Protein sequence
MNTAATVNDA SLAGADPQET APQPTTRLQR WRLVLGQPSE ASCGGLGPKG SSIDEMDKAL 
AALYEEDNKD GGLSRRGGRG NSSPSVARWL GDIRKYFPSQ VVQVMQRDAM ERLNLRELML
QPEMLEHVQP DVHMVADLIS LGSVIPQNTK ETARIVVRKV VDDLMRRLEE PMRSAVSGAL
DRSQRNRRPR HSEIDWNRTI RANLRHWQPD YRTIVPETLV GYGRKVRRPQ REVILCIDQS
GSMANSVVYS SIFGAVMASL PAVATRLVVF DTAVVDLTDK LSDPVDVLFG VQLGGGTDIN
RAVGYCQGLI SEPRNAIVVL ISDLYEGGVE SGLLRRASEL VESGVQFITL LALSDEGAPA
YDAQLAAKLA ALGVPSFACT PDAFPQLMAA AIRRDDVAAW AAGQGFKTSK