Gene Daci_4737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4737 
Symbol 
ID5750329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5191456 
End bp5192985 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content69% 
IMG OID641299842 
Producthypothetical protein 
Protein accessionYP_001565751 
Protein GI160900169 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.543565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCAGA TATCCGGAGT GTGGTGGGCG GCATGGGCCG TGCTGCTGTT GGGGCAGGCA 
GCCGTGATCT GGCTGCTGTG CAGGCGCTCG GCGCAGCGCG ATGACGGGGT GGCGCCGCAG
CAGTTGCTGC AGGCGCTGCA GATGCTGGAT GTGCGGCTGC AGCAGCTCGA GCGCGGCGCC
CAGGCCACGC AGATGGCCGT GGCCAAGAGC GACGGCGGGC TGGACCGCGT GTCGCAGCAA
CTGCAGGCCC ATCTGGCCCA GGCCCAGCTC GATGCCCAGG CGGCGCGGCG CGAGCAGGGC
GAGGCGCTGG CGGCCTTTCG CATGGAACTG GGCCGGCTCA CGGTGCGCCT GGCCGCCGAC
AGCGCCCAGG CCCGCGAGGC CCAGGGCGAA AGCACGCAGC GCTTCAACGC CCATGTGCAG
GAGCGCTTCG AGGCGCTGGC GCAGACCACG CGCAGCACGC TGGACTCCCT CAAGAACGAC
ATCCAGCAGC AGCTGGGCGG GCTGGCGCAA TCCAGCCAGG TCCATGCCGA ACAGCTGCGC
GGCACGCTCA ACGAGCGCCT GGCCACCATC CAGTCGGACA ACGCGGCGCG GCTGGAGGAG
ATGCGGCGCA CGGTGGACGA GAAGCTGCAT GCCACGCTGG AGCAGCGCCT GGGCGAATCG
TTCAAGCTGG TCAGCGACCG GCTGGAGCAG GTGCACAAGG GCCTGGGGGA GATGCAGACA
CTGGCCGGCA GCGTGGGCGA CCTCAAGCGC GTGATGACCA ATGTGAAGAC GCGCGGCACC
TGGGGCGAGC TGCAGCTGGG CGCCATCATC GAGAACGTGC TCACGCCCGA GCAGTACGCG
CGCAACGTCA AGACCGTGCC CGGCAGCGAC GACATGGTGG AGTTCGCCAT CCGCCTGCCC
GGGCGCAGCG ACGAGACGCC GGTCTGGCTG CCCATCGATG CCAAGTACCC GGTCGAGCAG
TACCAGCGCC TGCTGGATGC CCAGGATGCG GCGGACAAGG CCGCAATTGC CTCGGCCGGC
AATGCCTTCG AGGCATCGAT CAAGTTCGAG GCCCGCAAGA TCCATGGCAA GTATGTGAGC
CCGCCCCACA CCACGGACTT TGCCGTGCTC TACCTGCCCA CGGAAGGCCT GTTTGCCGAG
GTCATGCGCC GCCCCGGCCT GGTCGAGGCC GTGCAAAACG GCTGCCGCGT GATGGTCACC
GGCCCGGCCA ACCTGGCGGC CATGCTCAGC AGCCTGCAGA TGGGCTTCAA GACGCTGGCC
ATCGAAAAGC GATCGTCCGA GGTCTGGGCC GTGCTGGGCC AGGTCAAGAC CGAGTTCGCC
AAGTTCGGCG AAGTGGTGGA TGCCACGCGC AAATCCATCG ATGCCGCCGC CAAGCGCTTC
GAGCAGGTGG GCGTGCGCAC GCGCGCCATC CAGCGGCAAT TGCGCGATGT GCAGGAGTTG
CCCGCGCCGG CCTCGAGCGC AGGGCTGCCC GGTCTGCCGG ACGACAAGGA CACGGCGGCA
GGCATGGAGC CAGGGTCGGA GCAGGACTGA
 
Protein sequence
MTQISGVWWA AWAVLLLGQA AVIWLLCRRS AQRDDGVAPQ QLLQALQMLD VRLQQLERGA 
QATQMAVAKS DGGLDRVSQQ LQAHLAQAQL DAQAARREQG EALAAFRMEL GRLTVRLAAD
SAQAREAQGE STQRFNAHVQ ERFEALAQTT RSTLDSLKND IQQQLGGLAQ SSQVHAEQLR
GTLNERLATI QSDNAARLEE MRRTVDEKLH ATLEQRLGES FKLVSDRLEQ VHKGLGEMQT
LAGSVGDLKR VMTNVKTRGT WGELQLGAII ENVLTPEQYA RNVKTVPGSD DMVEFAIRLP
GRSDETPVWL PIDAKYPVEQ YQRLLDAQDA ADKAAIASAG NAFEASIKFE ARKIHGKYVS
PPHTTDFAVL YLPTEGLFAE VMRRPGLVEA VQNGCRVMVT GPANLAAMLS SLQMGFKTLA
IEKRSSEVWA VLGQVKTEFA KFGEVVDATR KSIDAAAKRF EQVGVRTRAI QRQLRDVQEL
PAPASSAGLP GLPDDKDTAA GMEPGSEQD