Gene Daci_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4657 
Symbol 
ID5750247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5115338 
End bp5115667 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content60% 
IMG OID641299760 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001565671 
Protein GI160900089 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.135136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00351139 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCACG TCGTCACCGA AAACTGCATC AAGTGCAAAT ACACAGATTG TGTGGATGTC 
TGCCCCGTGG ACTGCTTCCG CGAAGGCCCC AACTTCCTCG TGATCGATCC TGACGAGTGC
ATCGACTGCG CCGTGTGCAT TCCCGAATGC CCGGCCAATG CCATCTTTGC CGAGGAAGAC
GTCCCCGCCG ACCAACTGGC CTTCATCAAG CTCAATGCCG AGCTGTCGCT GGAAAAGGGC
TGGAAGAGCA TCACCAAGCG CAAGGCCTCG CTGCCCGACG CCGACGACTG GAACGGCAAG
CCCGGCAAGC TGGACCAGCT CGAACGCTGA
 
Protein sequence
MTHVVTENCI KCKYTDCVDV CPVDCFREGP NFLVIDPDEC IDCAVCIPEC PANAIFAEED 
VPADQLAFIK LNAELSLEKG WKSITKRKAS LPDADDWNGK PGKLDQLER