Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4648 |
Symbol | |
ID | 5750238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5105640 |
End bp | 5106701 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641299751 |
Product | periplasmic binding protein |
Protein accession | YP_001565662 |
Protein GI | 160900080 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.76116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000482562 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGATC TTCTGTTCAC CCGCCGCCGC TGGCTGGGCC AGGCCATGGC GGCGCTGGCC TCATCGGCTC TTGTTCCCGG CCATGCCCAG ACCACGACCA TTGCCGCGCG CATAGGCCAG ATACCGGACG CGACCAAACT GCGCCGGGTG TTTGCTGCCG GCCCCCCCGC AGGCGTGCTG GTGGCCACGC TGGCACCGCA CAAGCTGCTG GGCTGGCCCC AGCAGCTGGA CGATGTCTCG CGCTCCTACC TGGGCCCCAC ACTGCAGGCA CTGCCGCACC TGGGCCGCCT GTCCGGGCGC GGCAGCACCA TGCCGCTGGA GTCGCTGCTG AAGCTGCAGC CCGACCTGGT ACTGGACGCC GGCACGGCCG ATGCCACCTA TATCTCGACA ACCGAGCGGC TGGCGCGCCA GACCGGCCTG CCCTGCGTGC TGATCCAGGG CTCGCTGGCC GACCACGCAC GCCAGTTGCG CGAGGTCGGC GCCTTGCTGG GCGAGGCCGC ACGTGGCGAA ACCCTGGCCC GCCATGCCGA TGCCGTGGCG GCGCTGGCGC AGCGTGCCAC CCAGGGCATG GCACCGGCCG AGCGCCCGCG CGTGTACTTC GCACGCAGCG CCAATGGGCT GGAAACAGGG CTGGCGGGCT CCATCAATGT GGAAGCCGTC GAATATGCGG GCGGGCGCAA TGTGGCGACG GATGCAGGGC GTGGCGGGCT CACGCGCGTG TCCATGGAGC AGATCCTGGC CTGGGACCCG CAGGTCATCG TCACGCAGGA ACCCGGCCTT GCCGAGCGCA TGCGCCAGGA CCCGCTGTGG CGCGGCGTGG CCGCCGTGCG CTCGGGCCGC GTGCACTGCG CGCCGGTCTG GCCCTTCGGC TGGCTGGATG GTCCGCCCGG CGTCAACCGG CTGATCGGCG TGCGCTGGCT GCTGGAAAAG CTCCACCCGC AGGCGCCGGC ACTGCAGGGA CTGCCGCCGT TGGAACGCGA GGTGCGCGAC TTCTACCGCC TGTTCTACGG CGCCGACCTG TCGCCCGCAG CGCTGGGCAG GCTGATGGAG ACTGCGCGTT GA
|
Protein sequence | MTDLLFTRRR WLGQAMAALA SSALVPGHAQ TTTIAARIGQ IPDATKLRRV FAAGPPAGVL VATLAPHKLL GWPQQLDDVS RSYLGPTLQA LPHLGRLSGR GSTMPLESLL KLQPDLVLDA GTADATYIST TERLARQTGL PCVLIQGSLA DHARQLREVG ALLGEAARGE TLARHADAVA ALAQRATQGM APAERPRVYF ARSANGLETG LAGSINVEAV EYAGGRNVAT DAGRGGLTRV SMEQILAWDP QVIVTQEPGL AERMRQDPLW RGVAAVRSGR VHCAPVWPFG WLDGPPGVNR LIGVRWLLEK LHPQAPALQG LPPLEREVRD FYRLFYGADL SPAALGRLME TAR
|
| |