| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4640 |
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| Symbol | |
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| ID | 5750230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5096235 |
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| End bp | 5097245 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299743 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001565654 |
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| Protein GI | 160900072 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.374104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00000179955 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGTCA TGGTCTCGTT TGATTCTTTC CCCCGACACA CAGCCAACTG GCGCCGACGC
CAACTGCTGG GCGCGGGCCT TGCCGCAGCA GTCGCCACGG TGGGCGGCCC GGCCCTGGCC
CAGGACAAGG CGGGCGACCG CGTGCTGCGC GTGGGCCACC AAAAGGGCTG GCTGTCCATC
CTGAAGAGCC GGGGCACGCT GGAAAAGCGG CTGGCGCCGC TGGGCGTATC CGTGCGCTGG
ATCGAGTTCA ACGCCGGCCC CGTGCAGCTG GAGGCGCTGA ACGTGGGCTC CATCGACTTC
GGCGATGTGG GCGAGGCCCC GCCCATCTTT GCGCAGGCCG CAGGCGCGCC TTTGGTCTAT
GCGGGCGCCA CCGTGCCGCG CCCCGGGCTG GAGGCGGTGA TCGTGCCCAA GGATTCGCCC
ATTCGCAGCG TGCAGGACCT CAAGGGCAAG CGCGTGGCCT ACAACAAGGG CTCGAACGTG
CAGTACTTCC TGGTCAAGCT GCTGGAAAAG CACGGCCTGA AGTACGGCGA TGTGCAGTCC
GTCTTCCTGG CGCCGGCCGA TGCGCGTGCC GCCTTCGAGC GCGGCTCCGT CGATGCCTGG
CTGATCTGGG ACCCCTTCCT GGCTGCTGCG CAAAAGACGC TGGACGCCCG CCTGCTGGCC
GATGCCACGG GCGTGGTCAA CAACCGCGCC TACTACTTCA CCTCGCGCGA TTTCGCCACG
CGCAATGCCG ATGTGCTGCG CATTGCCATC GAAGAGGTCG ATGGGATTGA CCGCTGGGCC
TCGAAGAACC AGACGGCCGC TGCCGCCGAG CTGTCCAGCA TCCTGGGCCT GGACAAGTCC
ATCACCGAGC TGTACCTGAG CCGCGCACGC TTCGGCACCT CGTCCGTGAC ACGCGAGATC
CTGGCCGAGC AGCAGCAGAT CGCCGACACC TTCTTCGAGC TCAAGCTCAT CCCCCGCAAG
CTCAACCTGC TGCATGCCGC GCCGGTGGAC CTGATCGCGT CGCGCCCCTG A
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| Protein sequence | MSVMVSFDSF PRHTANWRRR QLLGAGLAAA VATVGGPALA QDKAGDRVLR VGHQKGWLSI
LKSRGTLEKR LAPLGVSVRW IEFNAGPVQL EALNVGSIDF GDVGEAPPIF AQAAGAPLVY
AGATVPRPGL EAVIVPKDSP IRSVQDLKGK RVAYNKGSNV QYFLVKLLEK HGLKYGDVQS
VFLAPADARA AFERGSVDAW LIWDPFLAAA QKTLDARLLA DATGVVNNRA YYFTSRDFAT
RNADVLRIAI EEVDGIDRWA SKNQTAAAAE LSSILGLDKS ITELYLSRAR FGTSSVTREI
LAEQQQIADT FFELKLIPRK LNLLHAAPVD LIASRP
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