| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4622 |
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| Symbol | |
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| ID | 5750212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5082984 |
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| End bp | 5083685 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299725 |
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| Product | TonB family protein |
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| Protein accession | YP_001565636 |
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| Protein GI | 160900054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.273599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000876595 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCAGT CTGATCGTTT TGGCCCCCCC GGGGGCCTTG GCCGTAACGT GGCCATCGCG
GGTTCGGTCG TGGTCTTGCA TGCAGCAACC CTTTGGGCGA TGCAGCATGG CCTGCTCCAG
CGCGCACCCG AAGAGGTCAT CGTGCCAGCC CAGGTGATTG CGGAATTCAT TTCGCCACCC
GCTCCCGAGC CCGAGGCACC CAAGCCCCCT CCTCCGCCGC CACCTCCCAA ACCGCAGCCG
GTCGTGAAGA AGGCACCGCC GCTGCCCAAG GCCATAGCCG ACCCCAAGCC CGCACCTGCG
GCGCCGCGCG GCACGCTGGA CGACGAGCCC AAGCCCGTGG TGGAAGCACC ACCGGCACCG
CCCGCCCCTC CTGCGCCGCC AGCGCCTCCC GCGCCCCCGG CACCACCGGC TCCGCCCAAG
ATCGAATTGC CGTCCACCAA CGCGGCCTAC CTCAACAACC CGGCCCCAAA CTACCCCGCC
ATCAGCAGGC GCATGGGGGA ACAGGGAACG GTCACGCTGC GCATCTTCGT GGACGCGCAA
GGCCTGCCTC AAAAGATCGA GGTCAGCAAA TCCAGCGGCT ACGACCGTCT GGACCAGCAG
GCCGTGGACG GCGTCAAGAA CTGGAAATTC GTCCCCGGCA AGAGCAACGG CACACCAACC
CCCATGTGGG TCACCGTCCC GGTCAAATTC ACCCTCAATT GA
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| Protein sequence | MSQSDRFGPP GGLGRNVAIA GSVVVLHAAT LWAMQHGLLQ RAPEEVIVPA QVIAEFISPP
APEPEAPKPP PPPPPPKPQP VVKKAPPLPK AIADPKPAPA APRGTLDDEP KPVVEAPPAP
PAPPAPPAPP APPAPPAPPK IELPSTNAAY LNNPAPNYPA ISRRMGEQGT VTLRIFVDAQ
GLPQKIEVSK SSGYDRLDQQ AVDGVKNWKF VPGKSNGTPT PMWVTVPVKF TLN
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