| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4592 |
|---|
| Symbol | |
|---|
| ID | 5750180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5051814 |
|---|
| End bp | 5052743 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641299693 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001565606 |
|---|
| Protein GI | 160900024 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATC TCAACGACAT GCTGTACTTC GCCGAGGTGG TGGAGCGCGG CGGCTTTGCC
TCTGCCGGGC GGGCGCTGGG CATACCCAAG TCGCGGCTGT CGCGGCGCGT GGCGGAGCTG
GAGGCCCGGC TGGGCGTGCG CCTGCTGCAG CGCACCACGC GCAAGCTCTC GCTGACCCAG
GTGGGCGAGG CCTATCTGCG CCATTGCCAG GCCATGCGCG ATGCGGCCCT GGCCGCCGCC
GACACCGTGG CCGAGGTGCA GACCGAGCCG CGCGGCACCA TCCGCGTGAG CTGCCCCGTG
ACCCTGGCCC AGACCGTGCT GGGCGAACTC ATGCCCCAGT TCCTGCAGCG CTGCCCGCTG
GTGCATGTGG AGATGCAGGT GACCAACCGG CCCGTGAACC TGGTGGAGGA GGGCATCGAC
GTGGCGCTGC GCGTGCGCCC CAGTCTGGAG GACAGCGGCT CCATGGTCGT CAAGCGGCTG
GATGTGGCGC GCCAGATCCT CGTGGCCAGC CCGGAGCTGC TGGAGCGCCA GGGCACGCCG
CGTGCACTGG CCGACCTGCA GCACCTGGAC AGCATGTCCA TGTCGGCGGT GGATGGCCAG
TCCAGCCTGC TGCTGGTCGG CCCCGAAGGC CGCGAGCAAC GCCTGCAGCT GCAGCCGCGC
TATGTGGTGG ATGACCTGCT GACGCTGAAA TTCGCAGCGC TGGCCGGCAG CGGCATGTGC
TGGCTGCCCG ACTACATGTG CCACGAGGAA CTGGCCGAAG GCCGGCTCGT GCACCTGCTG
CCGGGCTGGG AGCCGCCCCA GGGCATCGTG CACGCGGTCT TCCCCTCGCG GCGCGGCCTG
GCGCCGGCCG TGCGGCATTT CCTTGATTTC CTCGGCGAGA CCGTGCCGGG GCGCAACAGC
CATGCCACGC GCGAGCCGGC GGCACGCTAG
|
|---|
| Protein sequence | MMDLNDMLYF AEVVERGGFA SAGRALGIPK SRLSRRVAEL EARLGVRLLQ RTTRKLSLTQ
VGEAYLRHCQ AMRDAALAAA DTVAEVQTEP RGTIRVSCPV TLAQTVLGEL MPQFLQRCPL
VHVEMQVTNR PVNLVEEGID VALRVRPSLE DSGSMVVKRL DVARQILVAS PELLERQGTP
RALADLQHLD SMSMSAVDGQ SSLLLVGPEG REQRLQLQPR YVVDDLLTLK FAALAGSGMC
WLPDYMCHEE LAEGRLVHLL PGWEPPQGIV HAVFPSRRGL APAVRHFLDF LGETVPGRNS
HATREPAAR
|
|---|
| |