Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4581 |
Symbol | |
ID | 5750169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5040170 |
End bp | 5040934 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641299682 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001565595 |
Protein GI | 160900013 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CCGGCCTGGA GCGGGACTTC GACGGCCGCA CGGCCCTGGT CACCGGCGGC GCGGGCGGCA TCGGCCTGGC GATTGCCCGG CAGCTCGCCG AAGGAGGTGC GCGTGTCGTC CTGCTGGACC TGGAGCGGCA GGCACTGGAC GTGGCCGCTG CCAGCCTGGC GGAGCCCCGG CACCACCTGG CGCTGGAGGT GGATGTGACC AGGCCCGAGG GCGTGGAGCA GGCGGTGGCC ACGGTGCTGG AGGCCACGGG CCGCATCGAC ATCCTGGTCA ACAGCGCCGG CGTGGCGCTG CTGGAGCCGG CCGGCGAAGT CAGCGAGGCG GCGTGGGATC GCACGCTGGC CGTCAACCTC ACGGCGCCGC TGCTGCTGGC CCAGGCGGTG GCACCGGCCA TGCGCCGCCA GCGCCACGGA CGCATCATCA ACCTGGCCTC GCAGGCCAGC GTGGTCGCGC TCCGGCGCCA TGCCGCCTAT TGCGCCAGCA AGGCGGGCCT GGTGGGGCTG ACGCGCGTGC TGGCGCTGGA GTGGGCGTCC GACGGCATCA CCGTCAACGC CATCTCGCCG ACCGTGGTGG ACACGCCGCT GGGCCGCAAG GCCTGGGCCG GGCAGGTGGG GGAGGCCATG CGGGCACTCA TCCCCACGGG CCGCTTTGCG CAGCCCGAGG AGGTGGCGCG GCTGGCCGTG TTCCTGGCCG GTACGCACGC CGGCATGCTG ACGGGCGAGA ACATCGTCAT CGACGGGGGC TACTCCATCC AGTGA
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Protein sequence | MSAAGLERDF DGRTALVTGG AGGIGLAIAR QLAEGGARVV LLDLERQALD VAAASLAEPR HHLALEVDVT RPEGVEQAVA TVLEATGRID ILVNSAGVAL LEPAGEVSEA AWDRTLAVNL TAPLLLAQAV APAMRRQRHG RIINLASQAS VVALRRHAAY CASKAGLVGL TRVLALEWAS DGITVNAISP TVVDTPLGRK AWAGQVGEAM RALIPTGRFA QPEEVARLAV FLAGTHAGML TGENIVIDGG YSIQ
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