Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4545 |
Symbol | |
ID | 5750133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4997105 |
End bp | 4998799 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641299646 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001565559 |
Protein GI | 160899977 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.18473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCC AGCCCGCGCA CCACGCTTTC TGGCCCAGCC GCCTGCCCCA TTCCATCACC GTGCCCGCCA CCAGCGTCTG GGACAACCTG GCCGTCAATG CGCGACGCTA CCCGGACAAG GCAGCCATCC GCTACTTCGG CAGCTCCATC AGCTACCGCG AGCTGTGCGA GGGCACGGAG CGCATGGCGG CCTACCTGCA CAGCCTGGGC GTGCAGCGCG GCGACCGCGT GATCCTGCTG ATGCAGAACA CGCCCCAGCT CATCCTGGCG CACTACGCCA TCTTCCGCGC CAATGCGGTG GTGGTGCCGG TCAATCCCAT GAACATGGCC GAGGAGCTCA GGCACTACAT CACCGACGCC GACGCCAAGG TCGCCATCAC CACGGCCGAC CTGGCCCCCG AACTGGCCAA GGCCAGCAAT GCGCTGGCGC CCGGCCAGCG GCTGGAGCAC CTGGTCGTCA CCCAGTTCAC GGACGCCTTC GATGCCGGGG TGCAGGGCGA CGACGCCCCG CCCGTGCAGT GGCACGACTG GCTGCTCACC CGGCGTGAGC CGGCCGTGCT CGATGGCGGC AGCGTCCACA CCTGGCAGCA GGCCCTGGCC TGCAACGACG CCGCGCCGCC CCATGTGGTG GGCCGCGACG ACATGGCCGT GCTGCCCTAC ACCAGCGGCA CCACGGGCCA CCCCAAGGGC TGCATGCACC CGCACCGCTC CATCAACCAC AACGCCGTGG CGGGCAGCTA CTGGGGCAGC GGCACCAGCG AGACCGTGGT CCTGGCCGTC GTGCCCATGT TCCACATCAC GGGCATGGTC TCGGTGCTGC ACACGGCCAT CTTCGTGGGC GCCACCCTGG TCGTCATGCC GCGCTGGGAC CGCGAGCTGG CGGGGCGGCT GATCTCTCGC TACCAGGTCA CCAGCTGGAC CAACATCCCC ACCATGGTCA TCGACCTGCT GGGCAGCCCC AACTTTGCGC AGTTCGACCT CACCAGCCTC AAGTACATCG GCGGCGGTGG TGCGGCCATG CCACAGGCCG TGGCCCAGCG CCTGCTGGAG CAATACGGCC TGCGCTTCAG CGAGGGCTAC GGCCTGACCG AGACGGCCGC GCCCACGCAC AGCAACCCGT TCGAGCATCC CAAGCAGCAA TGCCTGGGCA TTCCCTTCAT GAGCACCGAG GCGCGTGTCA TCGACCCCGA AACCGGCGCC GATGTCCCGC AGGGCGAGCA GGGCGAAATC GTCGTCCACG GCCCCGAGGT CTTCGACGGC TACTGGAAGC GACCCGACGC CACGGCCCAG GTCTTCATGG AGATCGACGG CAAGCGGTTC TTTCGCACCG GCGACCTGGG CCACGTGGAC GAGGACGGCT ACTACTTCAT CACCGACCGC CTCAAGCGCA TGATCAACGC CAGCGGCTTC AAGGTCTGGC CGGCCGAGGT CGAATCGCTG ATGTTCCGCC ACCCCGCCAT CCAGGAAGCC TGCGTGATCT CCACGCGCGA CGCCTACCGC GGCGAGTCGG TCAAGGCCGT CGTCGTGCTG CGTGCCGGCA AGGAAGACAC CACGGCCGAG GACATCATCC AGTGGTGCCG CGAGAACATG GCCGTCTACA AGGCGCCCAA GATCGTGCAG TTCGTCAAGG CCCTGCCCAA GAGCGGCAGC GGCAAGGTGA TGTGGCGGCA ACTGCAGGAG GCGGAGGCCG GCTGA
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Protein sequence | MPSQPAHHAF WPSRLPHSIT VPATSVWDNL AVNARRYPDK AAIRYFGSSI SYRELCEGTE RMAAYLHSLG VQRGDRVILL MQNTPQLILA HYAIFRANAV VVPVNPMNMA EELRHYITDA DAKVAITTAD LAPELAKASN ALAPGQRLEH LVVTQFTDAF DAGVQGDDAP PVQWHDWLLT RREPAVLDGG SVHTWQQALA CNDAAPPHVV GRDDMAVLPY TSGTTGHPKG CMHPHRSINH NAVAGSYWGS GTSETVVLAV VPMFHITGMV SVLHTAIFVG ATLVVMPRWD RELAGRLISR YQVTSWTNIP TMVIDLLGSP NFAQFDLTSL KYIGGGGAAM PQAVAQRLLE QYGLRFSEGY GLTETAAPTH SNPFEHPKQQ CLGIPFMSTE ARVIDPETGA DVPQGEQGEI VVHGPEVFDG YWKRPDATAQ VFMEIDGKRF FRTGDLGHVD EDGYYFITDR LKRMINASGF KVWPAEVESL MFRHPAIQEA CVISTRDAYR GESVKAVVVL RAGKEDTTAE DIIQWCRENM AVYKAPKIVQ FVKALPKSGS GKVMWRQLQE AEAG
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