Gene Daci_4526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4526 
Symbol 
ID5750114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4977105 
End bp4978115 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID641299627 
ProductNMT1/THI5-like domain-containing protein 
Protein accessionYP_001565540 
Protein GI160899958 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.600337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTC CGCAATCCCC CTTCCTCACC CGCCGCAGCC TGCTGGGCGC CTCTGCCGGT 
TTTGCCGGCC TGGCGCTGGC CGGCAATTGC CTGGCCGCTC CTGTGCAAGG CAAGATCCGC
CTGGCAGGCT GGAGCAAGCC CATCAGCGAG ATCACCAACA TCCTGGCCGA GCCCGACAAG
GGCTTCTTCA AGGCCCAGGG CGTGGAGCTG GCCTACCTGC CCGGCGCGGG CGGCGGCGAC
GCCATCCGCA ACATGCTCAG CGGCCAGGCC GACGTGGCCT TCACCGACCC CGGCTCCTTC
TTCATGGCGC TGGACAAGGG CGAGAAGCTG GTCGCCATCT ACGACATCTA CCCGCAGAAC
GTGTTCAACG TGGTCTCGCT CAAGTCGGCG GGCATCCGCA AGCCGGCGGA CCTCAAGGGC
AAGAAGATCG GCGTCTACAG CCTGTCCAGC GGCACGCGCC AGAACCTGCT GGTGATGCTG
CACCAGGCGG GCCTGAAGGA ATCGGACGTG ACCATCGTCG TCACCGGCCT GCTCAACTTC
GCGCCGCTGA TGCAGGACCA GGTCGATGCC ACGGCCGCCA CCGACACCGG CCTGGCCGTG
GGCCTGCGCA AAGGCATTGG CGAGGTCGAT GTGATGCAGG TGCGCGACCA CCTGAACATC
TCCAGCGACA TGTTCGTGGT GCGCGAGGAC ACGCTGCGCG ACAAAAAGGA CCTGCTGCGC
GCCTTCCTCA AGGGCTACCG CGACAGCGCC GCCTGGATGA TGGCCAACCC CGATGAGGCC
GCCACGCTGG CCGGCAAGCA CGCCATCGAC GGCACGCAGC GCGATATCAA CCTGGATGTG
ATCCGCCTGC GCAATGCGTC TTCGCAGCCG CTGCAGGCCG GCAAGCCGCT GGGCAGCTTC
GACCTGGCCG CCCTGCAAAA GGGCGCCGAC GCCTACCGCG CGCTGGGCAT GGTGCAAAGG
CAGATCAAGG TGTCCGACGT GGTGGACACC AGCCTGCTGC CCGGGGCCTG A
 
Protein sequence
MHTPQSPFLT RRSLLGASAG FAGLALAGNC LAAPVQGKIR LAGWSKPISE ITNILAEPDK 
GFFKAQGVEL AYLPGAGGGD AIRNMLSGQA DVAFTDPGSF FMALDKGEKL VAIYDIYPQN
VFNVVSLKSA GIRKPADLKG KKIGVYSLSS GTRQNLLVML HQAGLKESDV TIVVTGLLNF
APLMQDQVDA TAATDTGLAV GLRKGIGEVD VMQVRDHLNI SSDMFVVRED TLRDKKDLLR
AFLKGYRDSA AWMMANPDEA ATLAGKHAID GTQRDINLDV IRLRNASSQP LQAGKPLGSF
DLAALQKGAD AYRALGMVQR QIKVSDVVDT SLLPGA