| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4505 |
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| Symbol | |
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| ID | 5750093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4929342 |
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| End bp | 4930571 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641299606 |
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| Product | diguanylate phosphodiesterase with GAF sensor(s) |
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| Protein accession | YP_001565519 |
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| Protein GI | 160899937 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.660376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.902865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTC GTAAATCCAC ATTCGCACCT TTGAGCAGAA TTTTCGCTTT TGCCATTGAA
CTGGATGGAG TCGACCGTGT TCTGTCTGTC GTTCGTCGGC ATCTCGGCAT GGATGTCGCC
TTCGTGGCCC GATTCCGGGA AGAGGATCGG GTGCTGGAGC ATGTGGACGA GAGCACTGCC
GGGGTGATTT TCCAGCATCA GAAGATTCCA TTGAGCGAGG GCTATTGCCA GAAAGTGGTC
AATGGCGAAT TGCCGGAGTT GATTCCCGAC ACCTCCCTGT TGGCCGCTGC CCAGGAGATA
CCGGAAACGC ACACCATTCC TATCGGCTCG CACCTGAGCG TTCCCATCCG ACTGAATGAC
AACCAATTGT TCGGCACCTT GTGCTGCTTC AGCCACCAGC CCAATCCTGC GCTGAATGTG
CACGATATGT CGCTGCTGCG GGCATTCTCC GATTTATTGG GACTTCATTT CAGTGCGACT
TCTGCCGTTC GGCATGCAAG AGACAAAGTG ACGCACGAAA TTCGGCTTGC AATGCAAGGC
AATGCGCTGC GCCCTGTATT TCAGCCCGTA TACACCGTCG CGACCGGAAA GCTGCACGGC
TTCGAATGTC TGTCACGCTT TGACCTGGAG CCACGTCGCC CGCCCGACCA GTGGTTCAAG
GCAGCGCACG AGGTGGGGCT GGGGCTGGAG CTGGAGCGCC ATGCGATCGA CACAGCGCTT
GGCGCACTTG GCAGCCTGCC CACCGACTGG CTGCTCGCCG TCAACTGCTC GCCGCAGTTG
ATTCAGTCAG GGCAGTTGCC CAGGCTTCTG GGTTCGGACC GGGATCTCTC ACGCGTGACG
CTGGAAATCA CGGAGCATGC CGCCGTGGAT GACTACAGGG CTTTGGCCGA TGCACTGGCG
CCGCTGCGGC GCCGGGGCGC GACCTTGGCA GTCGACGATG CGGGGGCCGG CTACTCCAGC
ATGCGGCACA TCCTGCATCT GCAACCAGAC ATGATCAAGC TGGACATGAG CATCACGCAC
GATGTCGATA CCGACCGCAG CCGCCGTGCG CTGGCCAAGG GCCTCACGAG CTTCGCGCAC
GAGATAGGAA GCGTGGTGGT TGCCGAGGGT GTGGAGACAG CCGAGGAATT CAACACTCTG
GCGAGCCTGG GCGTGGATTT GGCCCAGGGC TACTTTTTTG CCAAGCCGAT AGGGCCGCAA
GAGGCGCTGG CAATGGGCGC TGCAATATAG
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| Protein sequence | MTLRKSTFAP LSRIFAFAIE LDGVDRVLSV VRRHLGMDVA FVARFREEDR VLEHVDESTA
GVIFQHQKIP LSEGYCQKVV NGELPELIPD TSLLAAAQEI PETHTIPIGS HLSVPIRLND
NQLFGTLCCF SHQPNPALNV HDMSLLRAFS DLLGLHFSAT SAVRHARDKV THEIRLAMQG
NALRPVFQPV YTVATGKLHG FECLSRFDLE PRRPPDQWFK AAHEVGLGLE LERHAIDTAL
GALGSLPTDW LLAVNCSPQL IQSGQLPRLL GSDRDLSRVT LEITEHAAVD DYRALADALA
PLRRRGATLA VDDAGAGYSS MRHILHLQPD MIKLDMSITH DVDTDRSRRA LAKGLTSFAH
EIGSVVVAEG VETAEEFNTL ASLGVDLAQG YFFAKPIGPQ EALAMGAAI
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