Gene Daci_4494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4494 
Symbol 
ID5750082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4917961 
End bp4919868 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content70% 
IMG OID641299595 
Producthypothetical protein 
Protein accessionYP_001565508 
Protein GI160899926 
COG category[S] Function unknown 
COG ID[COG5267] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCCA CCCCACAGGC TGCAGCCTCC ACGCTGCAGC CGCCCGACCG CGCGCCCGCG 
GACTCCTTGC CTGCCTGCGC AGAGCCCGGC CATCTCGGCC ACGAAGCCAA GAATTCCTTG
ATGCCCCCCG CCATGGCCGC CTCCCTGGCG GCCGCGCTGC TGGTGGCCTG CGGGGGCGGT
GGGGGCGATA CGGCACCCGG TACCGGCAAT GGAGGCAACG GCGGCACTGG GGGCACGGGC
ACCGGCCCTG GTGGCGGAAC GGGTACCGGC ACCACGGCCA CCCCTGCCAG CGACGAAGAA
GCCGCGCGTT TCCTGCTGCA GGCGCAGTTC TCGGCCACCG ACGAGGAGAT CGCAGCGCTG
CGCGCCAAGG GCTACGGCCC CTGGCTGGCC GAGCAGTTCG CGCTGCCCGT GGACACCACG
GGCACGGCCT GGCTGATGCA GCGCGGCTAC GGCGTGGCAG AGGCCGGCAC GCGCTACGAC
AACGTTTCGT ATCCCTCCGA CTTCATGCTC TGGAGCCAGC TTTTCACGGA GCGCGACGCC
GTGCGCAAGC GTGTGGCATT GGCGCTGTCG GAGATCATGG TGGTCTCCAC CACGGGGCTG
GAGCAGCCCT GGAGCATCTT CCTGGCCTCC GGCTACTGGG ATCTGCTGAA CCAGCATGCC
TTCGGCAACT TCCGCACGCT GCTGGAGGCC GTCACGCTCA GCCCGGCCAT GGGCATCTAC
CTGAGCACGC GCGGCAACCA GAAGGAAGAC GCCCGCAGCG GCCGCCAGCC CGACGAGAAC
TACGCCCGCG AGGTGATGCA GCTGTTCACC ATCGGCCTCT ACCGCCTCAA CCCCGACGGC
ACCGAGCAGC GCGACGGCAG CGGCAACCGC ATCGATACCT ATTCGGCAGC CGACGTGAGC
AACCTGGCGC GCGTCTTCAC CGGCTACGAC TACGACACCA GCAAGAACCA GCCCACCAAC
CTGAGCGGCA GCACGGTGAC GGGGCTGCAG CAGGCGCTGC TGCCCATGGC ATTCAACGCA
GCGCGCCATT CCACGCTGGC CGCCACTTTC CTGGGCACCA CCGTGGCTGC GGGCACGTCA
GGGCCAGCGG CGCTGAAGGC GGCGCTGGAC ACGCTGTTCA ACCACCCCAA CGTCGGGCCC
TTCATCGGGC GCCAGCTGAT CCAGCGCCTG GTCACCAGCA ACCCCAGCCC CGCCTATGTG
GGGCGCGTGG CCGCCGCCTT CGCCGACAAC GGCAGCGGCA CGCGGGGCGA CCTGCGCGCC
GTGATCGCCA CCGTGCTGCT GGACCCGGAG GCGCGGGGCG CGGCAGGGCT TGCCAGCCCC
CAGTACGGCC GCCTGCGCGA GCCCATGGTG CGCTTCGTGC AGTGGGGCCG CACCTTCGGG
CTGCGGTCGG CACGCGGCAC CTGGAAGATC GACAACCTGA GCGACCCGGC CACGCGCCTG
GGCCAGAGCC CGCTGCGCTC GGGCTCGGTG TTCAACTTCT TCCGCCCGGG CTACGTGCCT
CCCTCCACGC CCCTGGCCAC GACGGGCCAG GTGGCGCCGG AGTTCCAGAT CGTCACCGAG
ACCAGCGTGA GCGGCTACCT GAACTTCATG CAGAACGTGA TCCGCTTCGG CTACTACGTG
AACGCGCCAG ACCTGCCCCA GGGCGGCAGC AGCGCGGCCA ACGGCTTCGA CATCACCTGC
AGCTACGCCA ACCTGCTGCC CCTGGTGGCC GACGCCGCCG CGCTGGTGCG CAAGGTGGCG
CTGCTGCTGT CGGCAGGGCA GGTATCGGCC GCCACGCAGA CGCGCATCGT GGCAGCGCTC
AATGCCACGC CGGTGACGGC CACCAGCAAC ACCGCCACCC AGCTCAACCG CGTGGCAGCC
GCCGTGCTGC TGGTGATGGC CAGTCCCGAA TATCTGGTGC AGAAGTGA
 
Protein sequence
MHPTPQAAAS TLQPPDRAPA DSLPACAEPG HLGHEAKNSL MPPAMAASLA AALLVACGGG 
GGDTAPGTGN GGNGGTGGTG TGPGGGTGTG TTATPASDEE AARFLLQAQF SATDEEIAAL
RAKGYGPWLA EQFALPVDTT GTAWLMQRGY GVAEAGTRYD NVSYPSDFML WSQLFTERDA
VRKRVALALS EIMVVSTTGL EQPWSIFLAS GYWDLLNQHA FGNFRTLLEA VTLSPAMGIY
LSTRGNQKED ARSGRQPDEN YAREVMQLFT IGLYRLNPDG TEQRDGSGNR IDTYSAADVS
NLARVFTGYD YDTSKNQPTN LSGSTVTGLQ QALLPMAFNA ARHSTLAATF LGTTVAAGTS
GPAALKAALD TLFNHPNVGP FIGRQLIQRL VTSNPSPAYV GRVAAAFADN GSGTRGDLRA
VIATVLLDPE ARGAAGLASP QYGRLREPMV RFVQWGRTFG LRSARGTWKI DNLSDPATRL
GQSPLRSGSV FNFFRPGYVP PSTPLATTGQ VAPEFQIVTE TSVSGYLNFM QNVIRFGYYV
NAPDLPQGGS SAANGFDITC SYANLLPLVA DAAALVRKVA LLLSAGQVSA ATQTRIVAAL
NATPVTATSN TATQLNRVAA AVLLVMASPE YLVQK